Job Description P30139 Confidence 97.73% Date Thu Jan 5 11:46:05 GMT 2012 Rank 209 Aligned Residues 207 % Identity 18% Template c3qw4B_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:ump synthase; PDBTitle: structure of leishmania donovani ump synthase Resolution 3.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence															.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		D	S	H	L	F	T	G	T	G	K	F	A	S	.	.	.	.	.	S	Q	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	.	.	.	.	.	.	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A
Query Conservation															.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence															.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	L	L	C	V	G	L	D	P	R	A	K	T	A	A	A	A	V	E	E	C	K	R	L	I	E	Q	T	H	E	Y	A	A	A	Y	K	P	N	A	A	F	F	E	F	F	G	A	E	G	W	A	A	L	S	E	V	I	R	A	V	P	A	G	I	P	V	V	L	D	A	K	R	G	D	I	A	D	T	A
Template Known Secondary structure		T												S	S																G	G	G		S					B						T	T														T	S		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																					.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	L	C	K
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		D	A	Y	A	T	S	A	F	K	H	L	N	A	H	A	I	T	A	S	P	Y	M	.	.	.	.	.	.	.	.	G	S	D	S	L	Q	P	F	M	R	Y	P	D	K	A	V	F	V	L	C	K	T	S	N	K	G	S	N	D	L	Q	C	L	R	V	G	D	R	Y	L	Y	E	A	V	A	E	R	A	E	G
Template Known Secondary structure										T	T	S			S						S	T	T	.	.	.	.	.	.	.	.										T		T	T	S									S	S	G	G	G	G	G	T	T	T	S			T	T												T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																		.														.	.	.	.	.	.
Query SS confidence																																																		.														.	.	.	.	.	.
Query Sequence		R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	.	P	S	H	A	A	Q	A	L	E	M	G	A	D	.	.	.	.	.	.	A	V	L	V	N	T	A	I	A	V	A	D
Query Conservation																																																		.														.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																								.														.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		P	W	N	V	N	G	N	V	G	L	V	V	G	A	T	D	.	.	.	.	.	.	.	.	.	P	V	A	L	A	R	V	R	A	R	A	P	T	L	W	F	L	V	P	G	I	G	A	Q	G	G	S	L	K	A	S	L	D	A	G	L	R	A	D	G	S	G	M	L	I	N	V	S	R	G	L	A	R	A	A
Template Known Secondary structure		T	T		T	T	S								T	T		.	.	.	.	.	.	.	.	.												S	S								S	S	T	T														T	T	S								S					S		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	V	N	M	A	K	A	F	R	L	A	V	E	A	G	L	L	A	R	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	R	A	A	A	K	E	L	C	E	E	I	N	A	I	R	F	A	K	G	A
Template Known Secondary structure																			S			S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions