Job Description P30139 Confidence 99.56% Date Thu Jan 5 11:46:05 GMT 2012 Rank 99 Aligned Residues 225 % Identity 16% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																														.	.	.	.	.
Query SS confidence																				.	.	.																														.	.	.	.	.
Query Sequence		K	T	F	D	S	H	L	F	T	G	T	G	K	F	A	S	S	Q	.	.	.	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	.	.	.	.	.	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A
Query Conservation																				.	.	.																														.	.	.	.	.
Alig confidence																				.	.	.																														.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		E	Q	F	D	Y	S	L	Y	L	V	T	D	S	G	M	I	P	E	G	K	T	L	Y	G	Q	V	E	A	G	L	Q	N	G	V	T	L	V	Q	I	R	E	K	D	A	D	T	K	F	F	I	E	E	A	L	Q	I	K	E	L	C	H	A	H	N	V	P	L	I	I	N	D	R	I	.	.	.	.	.	.	.
Template Known Secondary structure		G	G				S							S	T	T			T	T												S	S										S	S	S		T	T																T	T							S			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.
Predicted Secondary structure																																																								.	.																					.
Query SS confidence																																																								.	.																					.
Query Sequence		I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	.	.	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	.	A	P	I
Query Conservation																																																								.	.																					.
Alig confidence		.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.																				.	.																					.
Template Conservation		.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	D	V	A	M	A	I	G	A	D	G	I	H	V	G	Q	D	D	M	P	I	.	.	.	.	.	.	.	.	.	.	P	M	I	R	K	L	V	G	P	D	M	V	I	G	W	S	V	G	F	P	E	E	V	D	E	L	S	K	M	G	P	D	M	V	D	Y	I	G	V	G	T	L	F	P	T
Template Known Secondary structure		.	.	.	.	.							T		S						T	T	S	S			.	.	.	.	.	.	.	.	.	.									T	T	S								S	T								T	T		T	T	S										S
Template Predicted Secondary structure		.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
							79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		156	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure									.														.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence									.														.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		G	S	N	Q	G	L	E	.	T	R	A	M	L	E	I	I	I	Q	Q	A	T	.	.	.	.	.	.	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	.	.	.	.	.	.	.	.	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F
Query Conservation									.														.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence									.														.	.	.	.	.	.										.										.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		L	T	K	K	N	K	K	M	G	T	A	G	A	I	R	V	L	D	A	L	E	R	N	N	A	H	W	C	R	T	V	G	I	G	G	L	.	H	P	D	N	I	E	R	V	L	Y	Q	C	V	S	S	N	G	K	R	S	L	D	G	I	C	V	V	S	D	I	I	A	S	L	D	A	A	K	S	T	K	I	L
Template Known Secondary structure		S	S																					T	T		T	T							S	S		.		T	T	T									B		T	T	S			B		S					S	T	T	T	T	T		T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	V	E	A	G	L	L	A	R	Q	S	G	P	G	S	R	S	Y	F	A	H	A	T	S	P	L	T	G	F	L	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	L	I	D	K	T	D	Y	K	F	V	N	I	G	L	S	T	K	N	S	L	T	T	T	D	E	I	Q	S	I	I	S	N
Template Known Secondary structure						T			B				S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions