Return to main results Retrieve Phyre Job Id

Job DescriptionP30139
Confidence90.62%DateThu Jan 5 11:46:05 GMT 2012
Rank403Aligned Residues164
% Identity9%Templatec3my9A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a muconate cycloisomerase from azorhizobium2 caulinodans
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 

































......
Query SS confidence 









































































. . . . . .
Query Sequence  AAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGAD. . . . . .
Query Conservation        
    
          
       
 
 
 
 
      
  
  
 
 
       
  
       ......
Alig confidence 



























..












...



























......
Template Conservation     
                        ..
    



    ...   
   
  

   
    
 



       
Template Sequence  RDRIPLSFSIADPDFDADLERMRAMVPA. . GHTVFKMKTGVKP. . . HAEELRILETMRGEFGERIDLRLDFNQALTPFGA
Template Known Secondary structure 
SB


SSTTT..T


SSS
...GGGS
TT


TTT
Template Predicted Secondary structure 









..







...










Template SS confidence 















































































   132.......140.........150......... 160.........170.. .......180.........190.........200......
 
   134.....140.........150.........160.........170.........180.........190....... ..200.........210..
Predicted Secondary structure 

























.





Query SS confidence 































































.














Query Sequence  PVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMG. ADAVLVNTAIAVADD
Query Conservation     

    



 
 
 
   
   
      
  
      


  


    
       
.

 
 




    
Alig confidence 















.......








































.











..
Template Conservation        
    
  

.......

    
      
      


 

           
     
 
  
    
..
Template Sequence  MKILRDVDAFRPTFIE. . . . . . . QPVPRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCG. . G
Template Known Secondary structure  TT

S
.......

S
TT

SS
STT
SST

S

T..S
Template Predicted Secondary structure 


.......



























..
Template SS confidence 















































































   207..210.........220.. .......230.........240.........250.........260.........270...... .
 
   213......220.........230.......
Predicted Secondary structure 






Query SS confidence 
























Query Sequence  PVNMAKAFRLAVEAGLLARQSGPGS
Query Conservation 
         

         
   
Alig confidence 
























Template Conservation 

        
   

        
Template Sequence  LMKAQSLMAIADTAGLPGYGGTLWE
Template Known Secondary structure  T





Template Predicted Secondary structure 








Template SS confidence 
























   278.280.........290.........300..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions