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Job DescriptionP30139
Confidence99.43%DateThu Jan 5 11:46:05 GMT 2012
Rank117Aligned Residues161
% Identity17%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90...... ...100.........110......... 120.........130.........
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Query Sequence  GVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKL. EIHPDARWLLPDPIETLKAAETL. VQQGFVVLPYCGADPVLCKR
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Template Sequence  HIQINPSILSADLARLGDDVKAVLAA. . GADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIES
Template Known Secondary structure 

BGGGS
GGGT..T


BSSSSS
B


T

S

SS
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   3......10.........20........ .30.........40.........50.........60.........70.........80
 
   140.........150...... ...160.........170.
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Query Sequence  LEEVGCAAVMPLGAPIG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SNQGLETRAMLEIII
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Template Sequence  FAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFQKFIPAMLDKAKEIS
Template Known Secondary structure  T
S
GGG
S
TTTS
TT

SGGGTTTGGG
S
S
TT




TT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   172 .......180.........190.........200.........210.........220.....
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Query Sequence  Q. . . . . QATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAVE
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Template Sequence  KWISSTDRDILLEIDGGV. NPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELN
Template Known Secondary structure  TS

SS
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TTTTTT

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   163......170.........180 .........190.........200.........210.........220
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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