Job Description P30139 Confidence 92.28% Date Thu Jan 5 11:46:05 GMT 2012 Rank 380 Aligned Residues 205 % Identity 15% Template c3gk0H_ PDB info PDB header:transferase Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei Resolution 2.28 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	K	F	A	S	S	Q	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	.
Query Conservation																																																																																	.
Alig confidence																																																							.	.	.															.	.	.	.						.
Template Conservation																																																							.	.	.															.	.	.	.
Template Sequence		T	A	Y	P	D	P	V	R	A	A	L	A	A	E	D	A	G	A	D	A	I	T	L	H	L	R	E	D	R	R	H	I	V	D	A	D	V	R	T	L	R	P	R	V	K	T	R	M	N	L	E	C	A	.	.	.	V	T	P	E	M	L	D	I	A	C	E	I	R	P	.	.	.	.	H	D	A	C	L	V
Template Known Secondary structure		S	S		S												T	T		S								T	T		S	S	S									T	T	T		S	S								.	.	.	S	S													.	.	.	.	S
Template Predicted Secondary structure																																																							.	.	.															.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.
							97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																			.																																						.
Query SS confidence		.	.	.	.	.																			.																																						.
Query Sequence		.	.	.	.	.	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	.	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	.	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I
Query Conservation		.	.	.	.	.																			.																																						.
Alig confidence		.	.	.	.	.																			.																																						.
Template Conservation
Template Sequence		P	E	K	R	S	E	L	T	T	E	G	G	L	D	V	V	G	H	F	D	A	V	R	A	A	C	K	Q	L	A	D	A	G	V	R	V	S	L	F	I	D	P	D	E	A	Q	I	R	A	A	H	E	T	G	A	P	V	I	E	L	H	T	G	R	Y	A	D	A	H	D	A	A	E	Q	Q	R	E	F	E	R
Template Known Secondary structure				S	G	G	G	B		S	S		S	B		T	T	T	T														T	T									S														S														S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure						.	.	.	.	.	.																								.														.	.	.
Query SS confidence						.	.	.	.	.	.																								.														.	.	.
Query Sequence		I	I	Q	Q	.	.	.	.	.	.	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	.	G	A	D	A	V	L	V	N	T	A	I	A	V	.	.	.	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V	E	A	G	L	L	A
Query Conservation						.	.	.	.	.	.																								.														.	.	.
Alig confidence						.	.	.	.	.	.												.												.														.	.	.
Template Conservation																							.
Template Sequence		I	A	T	G	V	D	A	G	I	A	L	G	L	K	V	N	A	G	H	G	L	.	H	Y	T	N	V	Q	A	I	A	A	L	P	G	I	A	E	L	N	I	G	H	A	I	V	A	H	A	V	F	V	G	W	D	N	A	V	R	E	M	K	A	I	M	V	A	A	R	V	A
Template Known Secondary structure												T	T							T	T		.		T	T	T							S	T	T
Template Predicted Secondary structure																							.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions