Job Description P30139 Confidence 96.52% Date Thu Jan 5 11:46:05 GMT 2012 Rank 258 Aligned Residues 158 % Identity 16% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																			.	.													.	.	.													.	.
Query SS confidence																																																			.	.													.	.	.													.	.
Query Sequence		A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	.	.	I	E	T	L	K	A	A	E	T	L	V	Q	.	.	.	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.
Query Conservation																																																			.	.													.	.	.													.	.
Alig confidence																																																			.	.													.	.	.													.	.
Template Conservation
Template Sequence		P	S	T	P	V	I	A	D	A	D	T	G	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T
Template Known Secondary structure		T	T	S							T	T		S	S	S														T	T									B						B																					T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
								134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																											.							.	.	.
Query SS confidence		.	.	.	.	.	.																																											.							.	.	.
Query Sequence		.	.	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	.	V	P	V	V	V	D	.	.	.	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V
Query Conservation		.	.	.	.	.	.																																											.							.	.	.
Alig confidence		.	.	.	.	.	.																			.	.	.	.	.	.	.	.																	.							.	.	.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		H	G	Y	E	E	S	V	A	R	L	R	A	A	R	D	A	G	A	D	V	G	F	L	E	.	.	.	.	.	.	.	.	G	I	T	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	A	E	A	K	E	M	G	F	R	I	I	I	F
Template Known Secondary structure																		T		S					T	.	.	.	.	.	.	.	.	T														T	T	T	S		B						T	T	S	S	S												T		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V	E	A	G
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		P	F	A	A	L	G	P	A	.	V	A	A	M	R	E	A	M	E	K	L	K	R	D	G
Template Known Secondary structure		T	T	T	T					.															S
Template Predicted Secondary structure										.
Template SS confidence
		240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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