Job Description P30139 Confidence 98.39% Date Thu Jan 5 11:46:05 GMT 2012 Rank 167 Aligned Residues 139 % Identity 14% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.													.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.															.						.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.															.						.	.
Query Sequence		L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	.	.	.	.	.	.	.	.	.	.	.	.	I	L	E	P	L	I	A	A	G	V	T	L	L	P	.	N	T	S	G	A	.	.	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.															.						.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.															.						.	.																.
Template Conservation																																																																																.
Template Sequence		S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	.	A
Template Known Secondary structure										T	T		S						T	T					T	T			S	S	S	T	T																T			S	S								T	T	S		S	S														.	T
Template Predicted Secondary structure																																																																																.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	.	.	.	.	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A
Query Conservation																																																.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																													.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Sequence		G	A	Q	M	V	K	L	E	.	.	.	.	.	.	.	.	.	.	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	G	L	G	A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	A	.	.	.	.	.	.	.	.	.	V	P	T	L
Template Known Secondary structure		T		S						.	.	.	.	.	.	.	.	.	.			G	G	G										T	T																									T		S						S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.											.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	A	E	V	T	R	E	L	S	I	P	T	I	G	I	G	A
Template Known Secondary structure											S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions