Job Description P30139 Confidence 96.79% Date Thu Jan 5 11:46:05 GMT 2012 Rank 247 Aligned Residues 168 % Identity 12% Template c3dfhC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase / muconate2 lactonizing enzyme from vibrionales bacterium swat-3 Resolution 2.20 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																.																																													.	.	.	.	.
Template Conservation																																.
Template Sequence		K	S	R	D	A	I	P	V	Y	T	H	A	T	S	D	T	M	E	G	I	Y	D	L	V	E	G	F	L	E	K	.	G	Y	K	H	I	R	C	Q	L	G	F	D	Q	D	Q	Y	M	D	N	T	L	T	M	F	K	S	L	R	E	K	Y	G	N	Q	F	H	I	L	H	D	V	H	E	R	L	F	P	N	Q
Template Known Secondary structure			S	S	S											S	S														T	.	T																															T	T	S	S							T	T		S
Template Predicted Secondary structure																																.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
			134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.																																																																	.
Query SS confidence		.																																																																	.
Query Sequence		.	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	.	A	D	A	V	L	V	N	T	A	I	A	V	A	D
Query Conservation		.																																																																	.
Alig confidence		.																	.	.	.	.	.	.	.																																										.										.	.
Template Conservation																			.	.	.	.	.	.	.																																																				.	.
Template Sequence		A	I	Q	F	A	K	E	V	E	Q	Y	K	P	Y	F	I	E	.	.	.	.	.	.	.	D	I	L	P	P	N	Q	T	E	W	L	D	N	I	R	S	Q	S	S	V	S	L	G	L	G	E	L	F	N	N	P	E	E	W	K	S	L	I	A	N	R	R	I	D	F	I	R	C	H	V	S	.	.	Q	I	G
Template Known Secondary structure										G	G	G			S				.	.	.	.	.	.	.			S		T	T		G	G	G						T	T									T	T			S										T	T			S						T	T	.	.	T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.																																																				.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	V	N	M	A	K	A	F	R	L	A	V	E	A	G	L	L	A	R	Q	S	G	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	T	P	A	L	K	L	G	H	L	C	Q	N	F	G	V	R	I	A	W	H	C	P	P
Template Known Secondary structure		S															T									T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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