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Job DescriptionP30139
Confidence85.24%DateThu Jan 5 11:46:05 GMT 2012
Rank449Aligned Residues141
% Identity16%Templatec3ddmD_
PDB info PDB header:lyaseChain: D: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme from bordetella bronchiseptica rb50
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
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Query Sequence  NDAILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAETLVQQGFVVLPYC
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Template Sequence  GQPLWAWLGGSGDRIGVYASGINPENPEDVVARKAAE. . GYRAFKLKVGFD. . . . DARDVRNALHVRELLGAATPLMADA
Template Known Secondary structure  T
BTT
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   133......140.........150.........160......... 170.........180. ........190.........200......
 
   131.. ......140.........150.........160.........170.........180.........190........ .200...
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Query Sequence  GAD. . . . . . PVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGA. DAVLV
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Template Sequence  NQGWDLPRARQMAQRLGPAQLDWL. . . . . . EEPLRADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQP
Template Known Secondary structure  TT


GGG
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   207..210.........220.........230 .........240.........250.........260.........270.........280
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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