Job Description P30139 Confidence 99.67% Date Thu Jan 5 11:46:05 GMT 2012 Rank 87 Aligned Residues 214 % Identity 19% Template c3atyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin f2a synthase; PDBTitle: crystal structure of tcoye Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.											.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	I	A	D	K	T	F	D	S	H	L	F	T	G	T	G	K	F	A	.	.	.	.	.	.	.	.	.	.	S	S	Q	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	G	R	Y	T	L	R	N	R	I	I	M	A	P	L	T	R	C	Q	A	T	E	D	D	H	V	P	R	T	E	S	M	L	K	Y	Y	E	D	R	A	S	A	G	L	I	I	A	E	A	T	M	V	Q	P	N	Y	T	G	F	L	T	E	P	G	I	Y	S	D	A	Q	I	E	E	W	R	K	I	V
Template Known Secondary structure					T	T				S		S											B		T	T	T			B											T	T	T	T	S	S									S	S	T	T			S	S	S	S			B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	V	H	K	K	G	G	L	I	F	L	Q	L	I	H	A	G	R	A	G	I	P	E	K	I	L	Q	Q	S	K	S	D	Q	D	P	L	A	G	R	L	L	A	A	S	A	I	P	I	K	D	H	R	I	P	A	Y	F	A	A	S	G	E	K	E	T	Y	G	V	P	E	E	L	T	D	D	E	V	R	D
Template Known Secondary structure							T	T											G	G	G	S						T	T	S				S	S	S	T	T	T	T					S	S	S					S			B		T	T	T	S	T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.											.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.											.
Query Sequence		K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	W	L	L	P	D	P	I	.	.	.	.	.	.	.	E	T	L	K	A	A	E	T	L	V	.	Q	Q	G	F	V	V	L	P
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.											.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		G	I	I	P	L	F	V	E	G	A	K	N	A	I	F	K	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	L	D	A	F	F	R	E	S	S	N	K	R	Q	S	G	P	Y	A	G	T	T	I	D	T	R	C	Q	L	I	Y	D	V	T	K	S	V	C	D	A	V	G	S	D	R	V	G	L	R	I
Template Known Secondary structure		T															T	S			S								T	T	S							S	T	T	T					S	S	T	T		T	T	S																					G	G	G
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		129	130	.	.	.														.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	C	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																														.
Template Conservation																																							.	.	.																														.
Template Sequence		S	P	L	N	G	V	H	G	M	I	D	S	N	P	E	A	L	T	K	H	L	C	K	K	I	E	P	L	S	L	A	Y	L	H	Y	L	R	.	.	.	G	D	M	V	N	Q	Q	I	G	D	V	V	A	W	V	R	G	S	Y	S	G	V	K	I	S	N	L	R	Y	.	D	F	E	E	A	D	Q	Q	I	R
Template Known Secondary structure			T	T			G	G	G				S														G	G	G			S							.	.	.	S		T	T	S												T	T			S						S	S		.
Template Predicted Secondary structure																																							.	.	.																														.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.
		196	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	G	.	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		E	G	K	V	D	A	V	A	F	G	A	K	F	I	A	N	P	D	L	V	E	R	A	Q	Q
Template Known Secondary structure		T	T	S		S					S							T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions