Job Description P30139 Confidence 99.91% Date Thu Jan 5 11:46:05 GMT 2012 Rank 23 Aligned Residues 204 % Identity 15% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.																																				.	.
Query SS confidence																									.	.	.	.	.	.																																				.	.
Query Sequence		R	I	A	D	K	T	F	D	S	H	L	F	T	G	T	G	K	F	A	S	S	Q	L	.	.	.	.	.	.	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	.	.	A	G	V	T	L	L	P	N	T	S	G	A	K	T
Query Conservation																									.	.	.	.	.	.																																				.	.
Alig confidence																									.	.	.	.	.	.																																				.	.
Template Conservation
Template Sequence		K	F	F	R	K	E	I	S	V	P	V	M	V	T	G	M	T	G	G	R	N	E	L	G	R	I	N	K	I	I	A	E	V	A	E	K	F	G	I	P	M	G	V	G	S	Q	R	V	A	I	E	K	A	E	A	R	E	S	F	A	I	V	R	K	V	A	P	T	I	P	I	I	A	N	L	G	M	P	Q	L
Template Known Secondary structure				T	T				S	S	S									S	S																		T															G	G	G	S											S	S	S								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		75	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure					.																																.	.	.	.	.	.	.	.																							.
Query SS confidence					.																																.	.	.	.	.	.	.	.																							.
Query Sequence		A	E	E	.	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	.	.	.	.	.	.	.	.	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	.	G	A	D	P	V	L	C	K	R	L	E	E	V	G
Query Conservation					.																																.	.	.	.	.	.	.	.																							.
Alig confidence					.																																.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		V	K	G	Y	G	L	K	E	F	Q	D	A	I	Q	M	I	E	A	D	A	I	A	V	H	L	N	P	A	Q	E	V	F	Q	P	E	G	E	P	E	Y	Q	I	Y	A	L	E	K	L	R	D	I	S	K	E	L	S	V	P	I	I	V	K	E	S	G	N	G	I	S	M	E	T	A	K	L	L	Y	S	Y	G
Template Known Secondary structure		T	T	T													T	T		S														S	S	S							T														S	S							S	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		145	.	.	.	.	150	.	.	.	.	.	.	.																											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		C	A	A	V	M	P	L	G	A	P	I	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	.	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence											.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation											.	.
Template Sequence		I	K	N	F	D	T	S	G	Q	.	.	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	Y	S	V	P	D	S	F	L	V	G	S	G	G	I	R	S	G	L	D	A	A	K	A	I	A	L	G
Template Known Secondary structure										B	.	.	T	S	B													T	T		T								T	T	T		S		B												S	T	T							S	S			S											T
Template Predicted Secondary structure											.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	V	L	V	N	T	A	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	I	A	G	M	A	L	P	V	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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