Job Description P30139 Confidence 80.59% Date Thu Jan 5 11:46:05 GMT 2012 Rank 473 Aligned Residues 152 % Identity 18% Template c2zc8B_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:n-acylamino acid racemase; PDBTitle: crystal structure of n-acylamino acid racemase from thermus2 thermophilus hb8 Resolution 1.95 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																.												.	.	.	.	.	.																.												.	.	.	.	.
Template Conservation																																.												.	.	.	.	.	.																.
Template Sequence		V	R	Q	A	V	E	V	G	V	S	L	G	I	Q	P	S	V	E	D	T	L	R	V	V	E	R	H	L	E	E	.	G	Y	R	R	I	K	L	K	I	K	P	.	.	.	.	.	.	G	W	D	Y	E	V	L	K	A	V	R	E	A	F	P	.	E	A	T	L	T	A	D	A	N	S	A	Y	S	L	A	N
Template Known Secondary structure				S				B								S	S														T	.	T		S							B	T	.	.	.	.	.	.	T	B	S												T	.	T	S							T	T				G	G	G
Template Predicted Secondary structure																																.												.	.	.	.	.	.																.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	.	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D
Query Conservation																																																																		.
Alig confidence																		.	.	.	.	.	.	.																																										.													.	.
Template Conservation																		.	.	.	.	.	.	.																																																							.	.
Template Sequence		L	A	Q	L	K	R	L	D	E	L	R	L	D	Y	I	E	.	.	.	.	.	.	.	Q	P	L	A	Y	D	D	L	L	D	H	A	K	L	Q	R	E	L	S	T	P	I	C	L	D	E	S	L	T	G	A	E	K	A	R	K	A	I	E	L	G	A	G	R	V	F	N	V	K	P	A	R	L	G	.	.	G
Template Known Secondary structure								G	G	G	G	T		S				.	.	.	.	.	.	.			S		T	T		S											S	S					S	T	T			S											T			S										T	.	.	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.																																																							.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.								.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	N	M	A	K	A	F	R	L	A	V	E	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	E	S	L	R	V	H	A	L	A	E	S	A	G
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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