Job Description P30139 Confidence 99.77% Date Thu Jan 5 11:46:05 GMT 2012 Rank 75 Aligned Residues 191 % Identity 21% Template c2yzrB_ PDB info PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from2 methanocaldococcus jannaschii Resolution 2.30 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																															.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.
Query Sequence		V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	.	.	.	.	.	.	A	L	G	T	N	W	L	K	L	E	I	H	P
Query Conservation																																																															.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																												.	.	.	.	.	.								.
Template Conservation														.	.	.	.	.	.																																																									.
Template Sequence		A	L	V	L	E	A	I	G	V	D	M	I	.	.	.	.	.	.	D	E	S	E	V	L	T	Q	A	D	P	F	F	H	I	Y	K	K	K	F	N	V	P	F	V	C	G	A	R	N	L	G	E	A	V	R	R	I	W	E	G	A	A	M	I	R	T	K	G	E	A	G	T	G	N	I	.	V	E	A	V	R
Template Known Secondary structure								T	T		S			.	.	.	.	.	.				T	T	S			S		S	S					G	G	G		S	S							S	S										T	T		S								T	T	S			T	.
Template Predicted Secondary structure														.	.	.	.	.	.																																																									.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.
		101	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.
Predicted Secondary structure										.	.																																																																.	.	.	.
Query SS confidence										.	.																																																																.	.	.	.
Query Sequence		D	A	R	W	L	L	P	D	.	.	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	.	.	.	.	Q	Q	A
Query Conservation										.	.																																																																.	.	.	.
Alig confidence										.	.																							.	.																																								.	.	.	.
Template Conservation																																		.	.
Template Sequence		H	M	R	L	M	N	E	A	I	A	Q	L	Q	R	M	T	D	E	E	V	Y	G	V	A	K	F	Y	A	N	R	Y	A	.	.	E	L	A	K	T	V	R	E	G	M	G	L	P	A	T	V	L	E	N	E	P	I	Y	E	G	F	T	L	A	E	I	I	D	G	L	Y	E	V	L	L	E	V	K	K	L	G
Template Known Secondary structure														T	T	S														G	G	G	G	.	.										T	T	S		S				T	T	S				T	T																					T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		T	V	P	V	V	V	D	A	.	.	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V	E	A
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		R	L	P	V	V	N	F	A	A	G	G	V	A	T	P	A	D	A	A	L	M	M	Q	L	G	S	D	G	V	F	V	G	S	G	I	F	K	S	E	N	P	L	E	R	A	R	A	I	V	E	A	T	Y	N
Template Known Secondary structure		S		S	S						S				S										T	T		S					S					T	S	S															T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions