Job Description P30139 Confidence 99.56% Date Thu Jan 5 11:46:05 GMT 2012 Rank 98 Aligned Residues 194 % Identity 18% Template c2v82A_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase; PDBTitle: kdpgal complexed to kdpgal Resolution 2.1 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		D	S	H	L	F	T	G	T	G	K	F	A	S	S	Q	L	M	V	E	A	I	R	.	.	.	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R
Query Conservation																								.	.	.
Alig confidence					.																			.	.	.										.	.	.																																									.	.	.
Template Conservation					.																															.	.	.																																									.	.	.
Template Sequence		K	L	P	.	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	.	.	.
Template Known Secondary structure		S	S		.						T	T																	T							.	.	.		T	T	S	T	T													T	T	T	S									S										.	.	.
Template Predicted Secondary structure					.																															.	.	.																																									.	.	.
Template SS confidence
		6	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M
Query Conservation
Alig confidence		.	.													.	.	.	.	.	.	.	.	.	.	.	.																				.																										.	.	.	.	.	.
Template Conservation		.	.													.	.	.	.	.	.	.	.	.	.	.	.																				.																										.	.	.	.	.	.
Template Sequence		.	.	X	G	C	Q	L	I	V	T	P	N	I	H	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	I	R	R	A	V	G	Y	G	X	T	V	C	P	G	C	A	.	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F	G	.	.	.	.	.	.	P	Q	Y
Template Known Secondary structure		.	.	T	T							S	S			.	.	.	.	.	.	.	.	.	.	.	.										T	T									.	S										T	T		S					T	T						.	.	.	.	.	.
Template Predicted Secondary structure		.	.													.	.	.	.	.	.	.	.	.	.	.	.																				.																										.	.	.	.	.	.
Template SS confidence
				79	80	.	.	.	.	.	.	.	.	.	90													.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.
		167	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure										.	.																																											.
Query SS confidence										.	.																																											.
Query Sequence		L	E	I	I	I	Q	Q	A	.	.	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	.	A	K	A	F	R	L	A	V	E	A	G	L	L	A	R	Q
Query Conservation										.	.																																											.
Alig confidence										.	.											.																																.
Template Conservation																						.
Template Sequence		I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	.	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E	A	V	Q
Template Known Secondary structure							T	T	S		T	T							S	S		.		T	T	T								T		S						T	T	T			T	T
Template Predicted Secondary structure																						.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions