Job Description P30139 Confidence 95.38% Date Thu Jan 5 11:46:05 GMT 2012 Rank 305 Aligned Residues 156 % Identity 17% Template c2rusB_ PDB info PDB header:lyase(carbon-carbon) Chain: B: PDB Molecule:rubisco (ribulose-1,5-bisphosphate PDBTitle: crystal structure of the ternary complex of ribulose-1,5-2 bisphosphate carboxylase, mg(ii), and activator co2 at 2.3-3 angstroms resolution Resolution 2.30 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.					.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																						.			.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																						.			.	.	.	.
Query Sequence		T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	.	.	.	.	.	.	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	.	A	D	.	.	.	.	P	V	L	C	K	R	L	E	E
Query Conservation																																							.	.	.	.	.	.																						.			.	.	.	.
Alig confidence																.			.																				.	.	.	.	.	.																						.			.	.	.	.
Template Conservation																.			.
Template Sequence		R	P	K	P	F	A	E	A	C	H	A	F	W	L	.	G	G	.	D	F	I	K	N	D	E	P	Q	G	N	Q	P	F	A	P	L	R	D	T	I	A	L	V	A	D	A	M	R	R	A	Q	D	E	T	G	E	A	K	L	F	S	A	N	I	T	A	D	D	P	F	E	I	I	A	R	G	E	Y	V	L	E
Template Known Secondary structure															T	.	T		.	S						T	T		S	S		S	S	S																					T	S											S	S
Template Predicted Secondary structure																.			.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		143	.	.	.						.	.	.																																																											150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	C	A	.	.	.	.	.	A	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	G	A	P	I	G	S	N	Q
Query Conservation						.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	G	E	N	A	S	H	V	A	L	L	V	D	G	Y	V	A	G	A	A	A	I	T	T	A	R	R	R	F	P	D	N	F	L	H	Y	H	R	A	G	H	G	A	V	T	S	P	Q	S	K	R	G	Y	T	A	F	V	H	C	K	M	A	R	L	Q	G	A	S	G	I	H	T	G	T	M	G	F	G	K
Template Known Secondary structure				G	G	G	G	G	G																							T	T	S								S	T					S	S	S			S															T		S									S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.																.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.		.	.	200		.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.				.				.													.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.				.				.													.
Query Sequence		G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	.	E	M	G	.	A	D	A	.	V	L	V	N	T	A	I	A	V	A	D	D	.	P	V	N	M	A	K	A	F
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.				.				.													.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.										.				.				.													.
Template Conservation																																										.
Template Sequence		G	E	S	S	D	R	A	I	A	Y	M	L	T	Q	D	E	A	Q	G	P	F	Y	R	Q	S	W	G	G	M	K	A	C	T	P	I	I	S	G	G	M	.	N	A	L	R	M	P	G	F	F	E	N	L	G	N	A	N	V	I	L	T	A	G	G	G	A	F	G	H	I	D	G	P	V	A	G	A	R	S	L
Template Known Secondary structure																S					S	S						T	T													.		T	T	T									S	S			S					S					T	S	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		221	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	V	E	A	G	L	L	A	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	A	W	Q	A	W	R	D	G	V	P
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions