 |
Job Description | P30139 | Confidence | 90.43% | Date | Thu Jan 5 11:46:05 GMT 2012 |
Rank | 405 | Aligned Residues | 112 |
% Identity | 18% | Template | c2qvhB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:o-succinylbenzoate-coa synthase; |
PDBTitle: crystal structure of o-succinylbenzoate synthase complexed with o-2 succinyl benzoate (osb)
|
Resolution | 1.76 Å |
|
 |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | H | L | A | R | E | A | L | G | T | N | W | L | K | L | E | I | H | P | D | A | R | W | L | L | P | D | P | I | E | T | L | K | A | A | E | T | L | V | Q | Q | G | F | V | V | L | P | Y | C | G | A | D | . |
. |
. |
. |
. |
. |
P | V | L | C | K | R | L | E | E | V | G | C | A | A | V | M | P | L | G | A | P | I |
Query Conservation |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |
| . |
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
| . | . | . | . | . | . | . |
Template Sequence |   |
A | A | R | I | V | A | S | S | G | C | T | T | A | K | V | K | V | A | E | R | G | Q | S | E | A | N | D | . |
V | A | R | V | E | A | V | R | D | A | L | G | P | R | G | R | V | R | I | D | V | N | G | A | W | D | V | D | T | A | V | R | X | I | R | L | L | D | R | F | E | L | E | Y | V | . |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |
|
|
| T | T |
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
| T | T | B | S |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
|
|
|
|
  |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
. | . | 200 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
G | S | N | Q | G | L | E | T | R | A | M | L | E | I | I | I | Q | Q | A | T | V | P | V | V | V | D | A | G | I | G | V | P | S | H | A | A | Q | A | L | E | M | G | . |
A | D | A | V | L | V |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
| . |
|
|   |
|   |
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
. | . |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
Template Sequence |   |
. |
. |
E | Q | P | C | A | T | V | D | E | L | A | E | V | R | R | R | V | S | V | P | I | A | A | D | E | S | I | R | R | A | E | D | P | L | R | V | R | D | A | E | A | A | D | V | V | V | L |
Template Known Secondary structure |   |
. | . |  |
|
| B | S | S |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  | S |  |  |  |  | S |
| S |
| T | T |  |  |  |  | T | T |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
. | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|