Return to main results Retrieve Phyre Job Id

Job DescriptionP30139
Confidence77.18%DateThu Jan 5 11:46:05 GMT 2012
Rank494Aligned Residues86
% Identity17%Templatec2pcqA_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative dihydrodipicolinate synthase; PDBTitle: crystal structure of putative dihydrodipicolinate synthase (ttha0737)2 from thermus thermophilus hb8
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170..... ....180.........190..... ....200...... ..
Predicted Secondary structure 

















.






....


.
Query SS confidence 








































.



















. . . .










.

Query Sequence  VLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQAT. VPVVVDAGIGVPSHAAQALE. . . . MGADAVLVNTA. IA
Query Conservation    

    



 
 
 
   
   
      
  
     . 


  


    
      .... 


 
 



.
 
Alig confidence 




.












.




















.



















....










.

Template Conservation       .
  

 

 
 

.


   

  

  

       


 

   

   
  
  
   
     
  
   
Template Sequence  ELAQA. LEPLVDGLLVYGS. NGEGVHLTPEERARGLRALRPRKPFLVGLXEETLPQAEGALLEAKAAGAXALLATPPRYY
Template Known Secondary structure  .GGGSS

T
T.TTTGGGS
T


SS



SST
S



TT
Template Predicted Secondary structure  .






.





















Template SS confidence 















































































   23.... ..30.........40 .........50.........60.........70.........80.........90.........100
 
   209210.........220..
Predicted Secondary structure 



Query SS confidence 













Query Sequence  VADDPVNMAKAFRL
Query Conservation     

         
Alig confidence 













Template Conservation         
      
Template Sequence  HGSLGAGLLRYYEA
Template Known Secondary structure  GGGTTT
Template Predicted Secondary structure 



Template SS confidence 













   101........110....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions