Job Description P30139 Confidence 81.58% Date Thu Jan 5 11:46:05 GMT 2012 Rank 470 Aligned Residues 161 % Identity 18% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.	.																																			.	.	.	.	.
Query SS confidence																										.	.	.																																			.	.	.	.	.
Query Sequence		D	S	H	L	F	T	G	T	G	K	F	A	S	S	Q	L	M	V	E	A	I	R	A	S	.	.	.	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	.	.	.	.	.	N	T	S	G	A	K	T	A	E	E	A	I	F	A
Query Conservation																										.	.	.																																			.	.	.	.	.
Alig confidence																										.	.	.																																			.	.	.	.	.
Template Conservation
Template Sequence		N	P	S	L	I	C	A	P	V	M	A	D	S	I	D	K	M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	D	W	L	K	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	P	L	P	T	L	F	T	Y	R	P	K	W	E	G	G	Q	Y	E	G	D	E	N	E	R	R
Template Known Secondary structure		S											S	S															T		S						G	G	G		S	S															S	S								B	G	G	G	T	S	S	B		S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		82	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure									.																																														.	.	.	.	.	.	.	.	.
Query SS confidence									.																																														.	.	.	.	.	.	.	.	.
Query Sequence		A	H	L	A	R	E	A	.	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L
Query Conservation									.																																														.	.	.	.	.	.	.	.	.
Alig confidence									.													.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		D	V	L	R	L	A	M	E	L	G	A	D	Y	I	D	V	E	L	Q	V	.	.	.	.	.	.	.	.	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	I	V	S	S	H	N	Y	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A	D	I	V	K	I	A
Template Known Secondary structure										T	T		S									.	.	.	.	.	.	.	.								T	T	T				S	S										S	S																		T	T		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		T	.	.	.	.	T	A	V	D	I	A	D	V	A	R	M	F	H	I	T	S	K	A	Q	V	P	T	I	G	L	V
Template Known Secondary structure			.	.	.	.			S	S	G	G	G												S	S
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		244					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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