Job Description P30139 Confidence 93.55% Date Thu Jan 5 11:46:05 GMT 2012 Rank 355 Aligned Residues 142 % Identity 15% Template c2jgqB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori Resolution 2.3 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																		.	.	.	.																																																							.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		R	D	C	G	A	F	T	G	E	I	T	S	K	H	L	E	.	.	.	.	E	L	K	I	H	T	L	L	I	G	H	S	E	R	R	T	L	L	K	E	S	P	S	F	L	K	E	K	F	D	F	F	K	S	K	N	F	K	I	V	Y	C	I	G	E	E	L	T	T	R	E	K	G	F	K	A	V	K	E	F
Template Known Secondary structure		S	S	S		S		T	T			B						.	.	.	.		T	T														T	S																	T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
											142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.																					.
Query SS confidence		.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.																					.
Query Sequence		.	.	.	.	.	.	.	.	.	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	.	.	.	.	.	.	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	.	E	M	G	A	D	A	V	L	V	N	T
Query Conservation		.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.																					.
Alig confidence		.	.	.	.	.	.	.	.	.																				.														.	.	.	.	.	.											.										.
Template Conservation																														.																														.
Template Sequence		L	S	E	Q	L	E	N	I	D	L	N	Y	P	N	L	V	V	A	Y	E	P	I	W	A	I	G	T	S	.	A	S	L	E	D	I	Y	L	T	H	G	F	L	K	Q	I	L	N	Q	K	T	P	L	L	Y	G	G	S	V	.	N	T	Q	N	A	K	E	I	L	G	I	D	S	V	D	G	L	L	I	G	S
Template Known Secondary structure							T	T	S		T	T		T	T								G	G	G	T	T			.														T	T	T	S		T	T	S						S	S		.		T	T	T						T	S	T	T								G
Template Predicted Secondary structure																														.																														.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	V	A	D	D	P	V	N	M	A	K
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		A	S	W	.	.	.	E	L	E	N	F	K	T
Template Known Secondary structure		G	G	G	.	.	.	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		220	.	.				.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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