Job Description P30139 Confidence 82.93% Date Thu Jan 5 11:46:05 GMT 2012 Rank 465 Aligned Residues 142 % Identity 11% Template c2gdqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:yitf; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from bacillus subtilis at 1.8 a resolution Resolution 1.80 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.		.	.
Predicted Secondary structure																																																															.	.	.	.	.	.											.
Query SS confidence																																																															.	.	.	.	.	.											.
Query Sequence		K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.	.	P	V	L	C	K	R	L	E	E	V	.	G	C
Query Conservation																																																															.	.	.	.	.	.											.
Alig confidence																		.														.	.	.																													.	.	.	.	.	.											.
Template Conservation																		.														.	.	.
Template Sequence		Q	W	I	S	R	S	V	S	N	V	E	A	Q	L	K	K	.	G	F	E	Q	I	K	V	K	I	G	G	T	S	.	.	.	F	K	E	D	V	R	H	I	N	A	L	Q	H	T	A	G	S	S	I	T	M	I	L	D	A	N	Q	S	Y	D	A	A	A	A	F	K	W	E	R	Y	F	S	E	W	T	N	I
Template Known Secondary structure		T															T	.	T									S	S	S		.	.	.																	T	T	S							T	T									T	T					T	T		S
Template Predicted Secondary structure																		.														.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	.	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V
Query Conservation																																																						.
Alig confidence						.	.	.	.	.	.	.																																										.							.	.
Template Conservation						.	.	.	.	.	.	.																																																	.	.
Template Sequence		G	W	L	E	.	.	.	.	.	.	.	E	P	L	P	F	D	Q	P	Q	D	Y	A	M	L	R	S	R	L	S	V	P	V	A	G	G	E	N	M	K	G	P	A	Q	Y	V	P	L	L	S	Q	R	C	L	D	I	I	Q	P	.	.	D	V	M	H	V	N	G	I	D	E	F	R	D	C	L	Q	L	A	R
Template Known Secondary structure						.	.	.	.	.	.	.			S		S	S										T	T		S	S						T	T			S										T	T			S					.	.		T	T	T	T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.																																																	.	.
Template SS confidence
		214	.	.	.								.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		225	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	G
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		285	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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