Job Description P30139 Confidence 97.54% Date Thu Jan 5 11:46:05 GMT 2012 Rank 219 Aligned Residues 169 % Identity 11% Template c2fdsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:orotidine-monophosphate-decarboxylase; PDBTitle: crystal structure of plasmodium berghei orotidine 5'-2 monophosphate decarboxylase (ortholog of plasmodium3 falciparum pf10_0225) Resolution 1.72 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G
Query Conservation
Alig confidence																																																								.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		K	N	V	F	D	Y	L	N	S	M	N	I	P	T	M	L	D	M	K	I	N	D	I	G	N	T	V	K	N	Y	R	K	F	I	F	E	Y	L	K	S	D	S	C	T	I	N	V	Y	M	G	T	S	M	L	.	.	.	.	K	D	I	C	F	D	Y	E	K	N	K	Y	Y	S	A	Y	V	L	I	K	T	T
Template Known Secondary structure											T	T																									T	T	S			S							T	T		S	T	T		.	.	.	.				S			T	T	T	T												S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		132	.																						.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query Sequence		A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G	C	A	.	.	.	.	.	.	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.
Template Sequence		N	K	D	S	F	I	F	Q	N	E	L	S	I	N	D	K	Q	A	Y	I	V	M	A	E	E	T	Q	K	M	A	T	D	L	K	I	D	Q	N	N	E	F	I	G	F	V	V	G	S	N	A	.	.	.	.	.	.	.	.	.	F	E	E	M	K	I	I	R	N	K	F	P	D	S	Y	I	L	S	P	G	I
Template Known Secondary structure		S	G	G	G					T	T				T	T																			T	T	G	G	G	T									T	T		.	.	.	.	.	.	.	.	.											S	T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		G	V	P	S	H	A	A	Q	A	L	.	.	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V	E	A	G	L	L	A	R	Q	S
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		D	L	Y	K	T	L	K	N	G	Y	N	K	D	Y	E	K	L	L	I	N	V	G	R	A	I	T	K	S	P	N	P	K	K	S	S	E	S	Y	Y	N	Q	I	I	Q	I	F	K	D	I	E	N
Template Known Secondary structure													S	S	G	G	G											T	S	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions