Job Description P30139 Confidence 96.01% Date Thu Jan 5 11:46:05 GMT 2012 Rank 279 Aligned Residues 214 % Identity 14% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.				.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																	.	.																	.	.	.												.	.	.				.	.	.	.	.	.
Query SS confidence																	.	.																	.	.	.												.	.	.				.	.	.	.	.	.
Query Sequence		M	L	R	I	A	D	K	T	F	D	S	H	L	F	T	.	.	G	T	G	K	F	A	S	S	Q	L	M	V	E	A	I	R	.	.	.	A	S	G	S	Q	L	V	T	L	A	M	.	.	.	K	R	V	.	.	.	.	.	.	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L
Query Conservation																	.	.																	.	.	.												.	.	.				.	.	.	.	.	.
Alig confidence																	.	.																	.	.	.												.	.	.				.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	K	I	N	D	V	K	F	G	E	G	F	T	I	I	A	G	P	C	S	I	E	S	R	E	Q	I	M	K	V	A	E	F	L	A	E	V	G	I	K	V	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	Y	G	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	G	L	V	T	V
Template Known Secondary structure						T	T				T	S	S								S	B																	T	T							B	S	S				S	S	T	T	S					T															T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	P	V	L	C	K	R	L	E	E
Query Conservation																																																																					.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.										.															.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.										.
Template Sequence		T	E	V	M	D	T	R	H	V	E	L	V	A	K	Y	.	.	.	.	.	.	.	.	.	S	D	I	L	Q	I	G	A	R	N	S	Q	N	.	.	.	.	.	.	F	E	L	L	K	E	V	G	K	.	V	E	N	P	V	L	L	K	R	G	M	G	N	T	I	Q	E	L	L	Y	S	A	E	Y	I	M	A
Template Known Secondary structure							G	G	G								.	.	.	.	.	.	.	.	.		S						G	G	G	T	T		.	.	.	.	.	.								T	T	.	S	S	S								T	T															T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.										.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		143	.	.	.			.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.							.	.																																			.	.	.	.	.	.																							.	.	.	.
Query SS confidence						.	.							.	.																																			.	.	.	.	.	.																							.	.	.	.
Query Sequence		V	G	C	A	.	.	A	V	M	P	L	G	.	.	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	.	.	.	.	.	.	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V	N	T	A	I	A	.	.	.	.
Query Conservation						.	.							.	.																																			.	.	.	.	.	.																							.	.	.	.
Alig confidence						.	.							.	.																																			.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		Q	G	N	E	N	V	I	L	C	E	R	G	I	R	T	F	E	T	A	T	R	F	T	L	D	I	S	A	V	P	V	V	K	E	L	S	H	L	P	I	I	V	D	P	S	H	P	A	G	R	R	S	L	V	I	P	L	A	K	A	A	Y	A	I	G	A	D	G	I	M	V	E	V	H	P	E	P	E	K	A
Template Known Secondary structure		T	T											B			S			S	S	S	S	B			T	T									B	S	S						S	S	T	T	T		S	G	G	G											T	T		S						B		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
							209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V	E	A	G	L	L	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		L	S	D	S	Q	Q	Q	L	T	F	D	D	F	L	Q	L	L	K	E	L	E	A	L	G	W	K	G
Template Known Secondary structure		S	S		T	T	T		B															T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions