Job Description P30139 Confidence 89.89% Date Thu Jan 5 11:46:05 GMT 2012 Rank 409 Aligned Residues 186 % Identity 15% Template c1vs1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																				.	.	.																		.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																				.	.	.																		.	.	.	.	.	.	.	.	.
Query Sequence		L	R	I	A	D	K	T	F	D	S	H	.	.	.	L	F	T	G	T	G	K	F	A	S	S	Q	L	M	V	E	A	I	R	.	.	.	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	.	.	.	.	.	.	.	.	.	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L
Query Conservation													.	.	.																				.	.	.																		.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																				.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	V	E	G	V	R	I	G	G	G	S	K	A	V	I	A	G	P	C	S	V	E	S	W	E	Q	V	R	E	A	A	L	A	V	K	E	A	G	A	H	M	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	L	G	L	E	G	L	K	L	L	R	R	A	G	D	E	A	G	L	P	V	V
Template Known Secondary structure					T	T				B	T	T	B								S	B																		T		S					B	S	S				S	S	T	T	S					T															T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	P	V	L	C	K	R	L	E	E
Query Conservation																																																																					.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.								.																	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.								.
Template Sequence		T	E	V	L	D	P	R	H	V	E	T	V	S	R	Y	.	.	.	.	.	.	.	.	.	A	D	M	L	Q	I	G	A	R	N	M	Q	N	.	.	.	.	.	.	F	P	L	L	R	E	V	.	G	R	S	G	K	P	V	L	L	K	R	G	F	G	N	T	V	E	E	L	L	A	A	A	E	Y	I	L	L
Template Known Secondary structure							G	G	G								.	.	.	.	.	.	.	.	.		S						G	G	G	T	T		.	.	.	.	.	.								.													T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.								.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		143	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure										.	.	.	.																															.	.	.	.							.	.
Query SS confidence										.	.	.	.																															.	.	.	.							.	.
Query Sequence		V	G	C	A	A	V	M	P	.	.	.	.	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	.	.	.	.	D	A	G	I	G	V	.	.	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V
Query Conservation										.	.	.	.																															.	.	.	.							.	.
Alig confidence										.	.	.	.																															.	.	.	.							.	.
Template Conservation
Template Sequence		E	G	N	W	Q	V	V	L	V	E	R	G	I	R	T	F	E	P	S	T	R	F	T	L	D	V	A	A	V	A	V	L	K	E	A	T	H	L	P	V	I	V	D	P	S	H	P	A	G	R	R	S	L	V	P	A	L	A	K	A	G	L	A	A	G	A	D	G	L	I	V
Template Known Secondary structure		T	T											B			S			S	S	S	S	B													B	S	S												S	G	G	G											T	T		S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions