|   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
A | A | G | V | T | L | L | P | N | T | S | G | A | K | T | A | E | E | A | I | F | A | A | H | L | A | R | E | A | L | G | T | N | W | L | K | L | E | I | H | P | D | A | R | W | L | L | P | D | P | I | E | T | L | K | A | A | E | T | L | V | Q | Q | G | F | V | V | L | P | Y | C | G | A | D | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |   |   |   |
|
|
|
|
|   |   |   | . | . | . |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|
Template Sequence |   |
R | T | S | I | P | I | A | W | T | L | A | S | G | D | T | A | R | D | I | D | S | A | L | E | M | I | E | T | R | . |
R | H | N | R | F | K | V | K | L | G | A | R | T | . |
. |
. |
P | A | Q | D | L | E | H | I | R | S | I | V | K | A | V | G | D | R | A | S | V | R | V | D | V | N | Q | G | W | D | E | Q | T | A |
Template Known Secondary structure |   |
| S |  |  |  | B |
|  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | S |
| S |  |  |  |  |  |
| S | S | S |
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | L | C | K | R | L | E | E | V | G | C | A | A | V | M | P | L | G | A | P | I | G | S | N | Q | G | L | E | T | R | A | M | L | E | I | I | I | Q | Q | A | T | V | P | V | V | V | D | A | G | I | G | V | P | S | H | A | A | Q | A | L | E | M | G | . |
A | D | A | V | L | V | N | T | A | I | A | V | A | D | D |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
| . |
|
|   |
|   |
|
|
|
|
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
| . | . |
|
Template Sequence |   |
S | I | W | I | P | R | L | E | E | A | G | V | E | L | V | E | . |
. |
. |
. |
. |
. |
. |
Q | P | V | P | R | A | N | F | G | A | L | R | R | L | T | E | Q | N | G | V | A | I | L | A | D | E | S | L | S | S | L | S | S | A | F | E | L | A | R | D | H | A | V | D | A | F | S | L | K | L | C | N | M | G | . |
. |
G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | . | . | . | . | . | . | . |
|
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  | S | T | T |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|  |  |  |  | T | . | . | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
|
. |
  |
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | N | M | A | K | A | F | R | L | A | V | E | A | G | L | L | A | R | Q | S | G | P | G | S |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
I | A | N | T | L | K | V | A | A | V | A | E | A | A | G | I | S | S | Y | G | G | T | M | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
|
| S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |