Job Description P30139 Confidence 99.88% Date Thu Jan 5 11:46:05 GMT 2012 Rank 39 Aligned Residues 204 % Identity 12% Template c1kbiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome b2; PDBTitle: crystallographic study of the recombinant flavin-binding domain of2 baker's yeast flavocytochrome b2: comparison with the intact wild-3 type enzyme Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		R	I	A	D	K	T	F	D	S	H	L	F	T	G	T	G	K	F	A	.	.	.	.	.	S	S	Q	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.
Template Conservation
Template Sequence		D	M	L	G	S	H	V	D	V	P	F	Y	V	S	A	T	A	L	C	K	L	G	N	P	L	E	G	E	K	D	V	A	R	G	C	G	Q	G	V	T	K	V	P	Q	M	I	S	T	L	A	S	C	S	P	E	E	I	I	E	A	A	P	S	D	K	Q	I	Q	W	Y	Q	L	Y	V	N	S	D	R	K	I
Template Known Secondary structure				T	T				S	S	S							S		G	G	G	T	S	T	T	T	T										S	S	S	S								T	T		S	S										S		S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																																.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		T	D	D	L	V	K	N	V	E	K	L	.	G	V	K	A	L	F	V	T	V	D	A	P	S	L	G	Q	R	E	K	D	M	K	L	K	F	S	N	T	K	T	N	V	E	E	S	Q	G	A	S	R	A	L	S	K	F	I	D	P	S	L	T	W	K	D	I	E	E	L	K	K	K	T	K	L	P	I	V	I
Template Known Secondary structure													.	T									S		S	S													T	T				S		S	S		S	G	G	G	G	G			S	S	S		T	T												T			S
Template Predicted Secondary structure													.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																			.	.	.	.	.	.	.
Query SS confidence																															.																			.	.	.	.	.	.	.
Query Sequence		L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	.	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	.	.	.	.	.	.	.	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	A
Query Conservation																															.																			.	.	.	.	.	.	.
Alig confidence							.	.																							.																			.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		K	G	V	Q	R	.	.	T	E	D	V	I	K	A	A	E	I	G	V	S	G	V	V	L	S	N	H	G	G	R	Q	L	D	F	S	R	A	P	I	E	V	L	A	E	T	M	P	I	L	E	Q	R	N	L	K	D	K	L	E	V	F	V	D	G	G	V	R	R	G	T	D	V	L	K	A	L	C	L	G	A
Template Known Secondary structure						S	.	.										T	T		S							T	T	T	T	S	S	T	T																	T	T	T	G	G	G	T	S						S	S			S											T
Template Predicted Secondary structure							.	.
Template SS confidence
		349	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	L	V	N	T	A	I	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	V	G	L	G	R	P	F	L	Y
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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