Return to main results Retrieve Phyre Job Id

Job DescriptionP0AED9
Confidence37.99%DateThu Jan 5 11:23:06 GMT 2012
Rank288Aligned Residues190
% Identity19%Templated1xj5a_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100..... ....110.........120......... 130.....
Predicted Secondary structure 



















.






......





Query SS confidence 










































.























. . . . . .





Query Sequence  LSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRGFES. IGGQCVFTSEWNKHAVRTYKANHY. . . . . . CDPATH
Query Conservation                      
      





 



 

  .


  
 


 
  
  

  
  ......      
Alig confidence 










































.























......





Template Conservation      
   
 
 
 
  
     
  




 
 
      
       
  



  

  
            
 

 
Template Sequence  LTERDECAYQEXITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDXCEIDKXVVDVSKQFFPDVAIGYEDPRVN
Template Known Secondary structure  TTTTTSS


T
SSSTT
TT

S

GGGGSTT
Template Predicted Secondary structure 

































Template SS confidence 















































































   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   136...140.........150.........160.........170.........180.........190.........200........ .210...
Predicted Secondary structure 
















































..
Query SS confidence 








































































. .




Query Sequence  HFNEDIRDITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFD. . VVRII
Query Conservation      

  
                        


 





 

 

  
            
 
  
   ..  


Alig confidence 















...............









.






...................




..




Template Conservation 
   

   
      ............... 

 

 
  .       ................... 
 
 

     
Template Sequence  LVIGDGVAFLKNAAEG. . . . . . . . . . . . . . . SYDAVIVDSS. DPIGPAK. . . . . . . . . . . . . . . . . . . ELFEKPFFQSVA
Template Known Secondary structure  S
TS
TT...............



.
TTSGGG...................GGGS
Template Predicted Secondary structure 






...............




.





...................

Template SS confidence 















































































   178.180.........190... ......200... ......210 .........220..
 
   214.....220.........230.........240.........250.........260.........270..... ....280.........290.
Predicted Secondary structure 



























..









Query SS confidence 





























































. .















Query Sequence  DARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQH. . RERIVLVGFRRDLNLK
Query Conservation      

 





 



      
  
   
  


 
    
       



  



 ..
 





 
      
Alig confidence 
















..


























............



..















Template Conservation    
 
 

 
    
  ..        
  

  

  
  
    ............

    
 
 
  

       
Template Sequence  RALRPGGVVCTQAESLW. . LHXDIIEDIVSNCREIFKGSVNYAWTS. . . . . . . . . . . . VPTYPSGVIGFXLCSTEGPDVD
Template Known Secondary structure 


TT..T

SS
............
TTSGGG
SSS


Template Predicted Secondary structure 









..





............














Template SS confidence 















































































   223......230......... 240.........250.........260...... ...270.........280........
 
   292.......300.
Predicted Secondary structure 









Query SS confidence 









Query Sequence  ADFTLRDISE
Query Conservation            
Alig confidence 









Template Conservation            
Template Sequence  FKHPLNPIDE
Template Known Secondary structure  SSS
SS


S
Template Predicted Secondary structure 





Template SS confidence 









   289290........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions