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Job DescriptionP0AED9
Confidence100.00%DateThu Jan 5 11:23:06 GMT 2012
Rank2Aligned Residues362
% Identity92%Templatec3lx6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: structure of probable cytosine-specific methyltransferase from2 shigella flexneri
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  PKPPAHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDE
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Template Sequence  PKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDE
Template Known Secondary structure 



SSTT

ST
TTTTT


TTS


TTT

SST
TT
SS

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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  AAAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQG
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Template Sequence  AAAEHIRQHIPEHDVLLAGFPCQPFSLAA. . . . . . . . . . . . . . CDTQGTLFFDVVRIIDARRPAXFVLENVKNLKSHDKG
Template Known Secondary structure  S


S






TT

..............GGGTTS

S
GGGGTGGGG
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   156...160.........170.........180.... .....190.........200.........210.........220.
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  KTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLD
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Template Sequence  KTFRIIXQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLD
Template Known Secondary structure  TTTSS

SSS
TTGGGTSSB

GGG


TT

GGGGGGGS
SS


TGGGS
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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  PMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQ
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Template Sequence  PXVEAK. YITPVLWKYLYRYAKKY. . . . . . . . . GXVYPNNPQSVTRTLSARYYKDGAEILI. DRGWDXATGEKDFDDPLN
Template Known Secondary structure  SS

GG.G




.........

TTSTT

B



GGGGGT
TTS.
SS

TTTTSS
TT
TTT
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   316...320. ........330........ .340.........350.........360...... ...370.........380....
 
   396...400.........410.........420.........430.........440.........450.........460..
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Query Sequence  QHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQ
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Template Sequence  QQHPRRLTPRECARLXGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQ
Template Known Secondary structure  TT



TSS
TTT

S


S
TS


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   395....400.........410.........420.........430.........440.........450.........460.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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