Job Description P0AED9 Confidence 91.99% Date Thu Jan 5 11:23:06 GMT 2012 Rank 162 Aligned Residues 78 % Identity 22% Template c3khkA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei. Resolution 2.55 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	.	.	.	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		E	P	Y	K	G	R	V	Y	D	P	A	M	G	S	G	G	F	F	V	S	S	D	K	F	I	E	K	H	A	N	V	K	H	Y	N	A	S	E	Q	K	K	Q	I	S	V	Y	G	Q	E	S	N	P	T	T	W	K	L	A	A	M	N	M	V	I	R	G	I	D	F	N	F	G	K	K	N	A	D	S	F	L
Template Known Secondary structure					S						S	S		T	T																			T	S						G	G	G																							T	T				B			S	S	S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	S	H	K	E	G	V	S	D	E	A	A	A	E	H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	Q	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	R	A	D	F	V	M	T	N	P	P
Template Known Secondary structure		S		S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.																	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions