Job Description P0AED9 Confidence 76.45% Date Thu Jan 5 11:23:06 GMT 2012 Rank 219 Aligned Residues 132 % Identity 19% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																														.																								.	.
Query SS confidence																														.																								.	.
Query Sequence		P	A	H	H	P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	.	G	G	Q	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	H	Y	.	.	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L	S	H	K	E	G	V	S	D	E
Query Conservation																														.																								.	.
Alig confidence																														.																								.	.																							.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	A	H	Q	D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	P	R	A	P	R	V	K	I	R	V	D	D	A	R	X	V	A	E	S	F	T	P	A	.	.	.	.
Template Known Secondary structure					S		G	G	G							S		G	G	G										S	T	T								S												S					T	T	T						S								T			T	T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		A	A	A	E	H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	S	L	A	G	V	S	K	K	N	S	L	G	R	A	H	G	F	A	C	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	.	A	R	R	P	A	M	F	V	L	E	N	V	K	N	L	K	S	H	D	Q
Query Conservation																																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.							.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.							.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	R	D	V	I	I	.	.	.	.	R	D	V	F	A	G	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	Q	N	F	T	T	V	E	F	F	E	H	C	H	R	G	L	A	P	G	G	L	Y	V	A	N	C	.	.	.	G	D	H	S	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.							.	.	.	.				S	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	S	B																						.	.	.				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.							.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template SS confidence
													156	.	.	.	160	.					.	.	.	.	.	.	.	.																170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	T	F	R	I	I	M	Q	T	L	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	G	A	K	S	E	L	A	G	X	X	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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