Job Description P0AED9 Confidence 100.00% Date Thu Jan 5 11:23:06 GMT 2012 Rank 9 Aligned Residues 327 % Identity 24% Template c3g7uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna modification methyltransferase2 encoded within prophage cp-933r (e.coli) Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L	S	H	K	E	G	V	S	D	E	A	A	A	E	H	I	R	Q	H	I
Query Conservation
Alig confidence																																													.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		S	L	N	V	I	D	L	F	S	G	V	G	G	L	S	L	G	A	A	R	A	G	F	D	V	K	M	A	V	E	I	D	Q	H	A	I	N	T	H	A	I	N	F	.	.	.	P	R	S	L	H	V	Q	E	D	V	S	L	L	N	A	E	I	I	K	G	F	.	.	.	.	.	.	.	.	.	F	K	N	D
Template Known Secondary structure									T		T	T	S										T									S													.	.	.	T	T	S							G	G	G										.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																													.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	S	L	A	G	V	S	K	K	N	S	L	G	R	A	H	G	F	A	C	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	A	R	R	P	A	M	F	V	L	E	N	V	K	N	L	K	S	H	D	Q	G	K	T	F	R	I	I	M	Q	T	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	P	I	D	G	I	I	G	G	P	P	C	Q	G	F	S	D	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	Q	L	Y	M	H	F	Y	R	L	V	S	E	L	Q	P	L	F	F	L	A	E	N	V	P	G	I	M	Q	E	K	Y	S	G	I	R	N	K	A	F	N	L	V
Template Known Secondary structure															T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		S								T	T	T	T		G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	G	Y	D	V	A	D	A	E	D	N	G	P	D	D	P	K	I	I	D	G	K	H	F	L	P	Q	H	R	E	R	I	V	L	V	G	F	R	R	D	L	N	L	K	A	D	F	T	L	R	D	I	S	E	C	F	P	A	Q	R	V	T	L	A	Q	L	L	D	P	M	V	E	A	K	Y	I	L	T
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.																														.	.	.
Template Conservation																		.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		S	G	D	Y	D	I	L	D	P	I	K	V	K	A	S	D	.	.	.	.	.	.	.	.	Y	G	A	P	T	I	R	T	R	Y	F	F	I	G	V	K	K	S	L	K	L	D	I	S	D	E	V	F	M	.	.	.	P	K	M	I	D	P	V	T	V	K	D	A	L	Y	G	L	P	D	I	I	D	A	N	W
Template Known Secondary structure			T	T											G	G	G	.	.	.	.	.	.	.	.	G	T		S	B												G	G	G						G	G	G	T	S	.	.	.			S										T	T	T			S	S					S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.																						.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	L	W	K	Y	L	Y	R	Y	A	K	K	H	Q	A	R	G	N	G	F	G	Y	G	M	V	Y	P	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	S	V	T	R	T	L	S	A	R	Y	Y	K	D	G	A	E	I	L	I	D	R	G	W	D	M	A	T
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	D	S	E	S	W	R	T	I	K	K	D	R	K	G	G	F	Y	E	K	L	W	G	Q	I	P	R	N	V	G	D	T	E	S	I	A	K	L	K	N	N	I	I	S	G	C	T	G	T	L	H	S	K	I	V	Q	E	R	Y	A	S	L	S	F	G	E	T	D	K	I	S	R	S	T	R	L	D	P	N
Template Known Secondary structure		S		S	S												S												T	T		S										T	T			S																	T			T	T		B		T	T	T			B	B			T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	K	D	F	D	D	P	L	N	Q	Q	H	R	P	R	R	L	T	P	R	E	C	A	R	L	M	G	F	E	A	P	G	E	A	K	F	R	I	P	V	S	D	T	Q	A	Y	R	Q	F	G	N	S	V	V	V	P	V	F	A	A	V	A	K	L	L	E	P	K	I	K	Q
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		G	F	C	P	T	L	V	R	P	I	H	P	Y	H	P	R	V	I	T	P	R	E	A	A	R	L	Q	G	F	P	.	.	.	.	D	W	F	R	F	H	V	T	K	W	H	S	F	R	Q	I	G	N	S	V	S	P	I	V	A	E	Y	I	L	K	G	L	Y	N	L	L	N	E
Template Known Secondary structure		S		B							B		S	S	S	S	S	B											T			.	.	.	.	T	T					S	S										T	S																		T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.					.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions