Job Description P0AED9 Confidence 93.43% Date Thu Jan 5 11:23:06 GMT 2012 Rank 146 Aligned Residues 178 % Identity 20% Template c3bkwB_ PDB info PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine dependent methyltransferase; PDBTitle: crystal structure of s-adenosylmethionine dependent methyltransferase2 (np_104914.1) from mesorhizobium loti at 1.60 a resolution Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		63	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		L	S	E	K	E	F	A	H	L	Q	T	L	L	P	.	.	.	K	P	P	A	H	H	P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	H	Y	C	D	P	A	T	H	H	F	N	E
Query Conservation																.	.	.
Alig confidence																.	.	.			.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		D	G	A	A	E	W	P	A	L	R	A	X	L	P	E	V	G	G	L	.	.	.	.	.	.	.	.	.	R	I	V	D	L	G	C	G	F	G	W	F	C	R	W	A	H	E	H	G	A	S	Y	V	L	G	L	D	L	S	E	K	X	L	A	R	A	R	A	A	G	P	D	T	G	I	T	Y	E	R	A	D
Template Known Secondary structure		T	T		T	T								S				T	T		.	.	.	.	.	.	.	.	.						T		T	T										T	T		S							S											T	S		S	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		D	I	R	D	I	T	L	S	H	K	E	G	V	S	D	E	A	A	A	E	H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	S	L	A	G	V	S	K	K	N	S	L	G	R	A	H	G	F	A	C	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	K	L	H	L	P	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	D	L	A	Y	S	S	L	A	L	H	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	V	A	R	L	F	R	T	V	H	Q	A	L	S	P	G	G	H	F
Template Known Secondary structure		G	G	G					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.																			.	.	.	.	110	.	.	.	.	.	.	.	.	.																				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
																												214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	R	P	A	M	F	V	L	E	N	V	K	N	L	K	S	H	D	Q	G	K	T	F	R	I	I	M	Q	T	L	D	E	L	G	Y	D	V	A	D	A	E	.	D	N	G	P	D	D	P	K	I	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation
Template Sequence		V	F	S	T	E	H	P	I	Y	X	A	P	A	R	P	G	W	A	I	G	R	R	T	W	P	I	D	R	Y	L	V	E	G	P	R	K	T	D	W	L	A	K	G	V	V	K	H	H	R	T	V	G	T	T	L	N	A	L	I	R	S	G	F	A	I	E	H	V	E	E	F	C	P	T	D	A	Q	I	T	A
Template Known Secondary structure												S	S	S	S				B					B						T	T							T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	K	H	F	L	P	Q	H	R	E	R	I	V	L	V	G	F	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	E	L	A	E	E	L	D	R	P	X	F	L	L	V	S	A	R	R
Template Known Secondary structure		S	G	G	G	G	G	G	G	T	S		S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions