Job Description P0AED9 Confidence 97.79% Date Thu Jan 5 11:23:06 GMT 2012 Rank 46 Aligned Residues 144 % Identity 18% Template c2yxdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable cobalt-precorrin-6y c(15)-methyltransferase PDBTitle: crystal structure of cobalamin biosynthesis precorrin 8w decarboxylase2 (cbit) Resolution 2.30 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	.	.	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L	S	H	K	E	G	V	S	D	E	A	A	A	E	H	I	R	Q	H	I
Query Conservation																																										.	.
Alig confidence																								.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	D	V	G	C	G	S	G	G	X	T	V	E	I	A	K	R	C	K	F	.	V	Y	A	I	D	Y	L	D	G	A	I	E	V	T	K	Q	N	L	A	K	F	N	I	K	N	C	Q	I	I	K	G	R	A	E	D	V	L	D	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S				S								T	T	S	S		.							S														T	T			S						S						G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	S	L	A	G	V	S	K	K	N	S	L	G	R	A	H	G	F	A	C	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	A	R	R	P	A	M	F	V	L	E	N	V	K	N	L	K	S	H	D	Q	G	K	T	F	R	I	I	M	Q	T	L
Query Conservation
Alig confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		.	E	F	N	K	A	F	I	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	I	E	K	I	I	E	I	L	D	K	K	K	I	N	H	I	V	A	.	.	.	.	.	.	.	N	T	I	V	L	E	N	A	A	K	I	I	N	E	F
Template Known Secondary structure		.			S						S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T	T							.	.	.	.	.	.	.			S
Template Predicted Secondary structure		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
			100	.	.	.	.	.	.	.	.	.																												110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	G	Y	D	V	A	D	A	E	D	N	G	P	D	D	P	K	I	I	D	G	K	H	F	L	P	Q	H	R	E	R	I	V	L	V	G	F	R	R
Query Conservation
Alig confidence																																	.	.
Template Conservation																																	.	.
Template Sequence		E	S	R	G	Y	N	V	D	A	V	N	V	F	I	S	Y	A	K	K	I	P	S	G	H	X	F	L	A	K	N	P	.	.	I	T	I	I	K	A	V	R
Template Known Secondary structure				T	T																	T	T										.	.
Template Predicted Secondary structure																																	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions