Job Description P0AED9 Confidence 100.00% Date Thu Jan 5 11:23:06 GMT 2012 Rank 10 Aligned Residues 256 % Identity 23% Template c2qrvA_ PDB info PDB header:transferase/transferase regulator Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 3a; PDBTitle: structure of dnmt3a-dnmt3l c-terminal domain complex Resolution 2.89 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		A	H	H	P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	C	.	.	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L	S	H	K	E	G	V	S	D	E	A	A
Query Conservation																																	.	.
Alig confidence																																	.	.																			.	.	.																					.	.	.	.	.	.
Template Conservation																																																					.	.	.																					.	.	.	.	.	.
Template Sequence		P	A	E	K	R	K	P	I	R	V	L	S	L	F	D	G	I	A	T	G	L	L	V	L	K	D	L	G	I	Q	V	D	R	Y	I	A	S	E	V	C	E	D	S	I	T	V	G	M	V	R	H	.	.	.	Q	G	K	I	M	Y	V	G	D	V	R	S	V	T	Q	K	H	I	Q	E	.	.	.	.	.	.
Template Known Secondary structure															T		T	T	T									T	T	B																						T	.	.	.	T	T								G	G	G									.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.																					.	.	.	.	.	.
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.				.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																																				.	.	.	.	.	.	.
Query SS confidence																													.																																				.	.	.	.	.	.	.
Query Sequence		A	E	H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	S	L	A	G	.	V	S	K	K	N	S	L	G	R	A	H	G	F	A	C	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	A	R	R	P	A	.	.	.	.	.	.	.	M	F	V	L	E	N	V	K	N	L
Query Conservation																													.																																				.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																					.					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	W	G	P	F	D	L	V	I	G	G	S	P	C	N	D	L	S	I	V	N	P	A	R	K	G	.	.	.	.	.	.	.	.	.	L	Y	E	G	T	G	R	L	F	F	E	F	Y	R	L	L	H	D	A	R	P	K	E	G	D	D	R	P	F	F	W	L	F	E	N	V	V	A	M
Template Known Secondary structure		.	.	.	.	.	.	.	T				S									G	G	G	B	T	T		T	T			T	.	.	.	.	.	.	.	.	.	T	T	S	T	T	T	T													S			T	T													S	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
									694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.										.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	H	D	Q	G	K	T	F	R	I	I	M	Q	T	L	D	E	L	G	Y	D	V	A	D	A	E	D	N	G	P	D	D	P	K	I	I	D	G	K	H	F	L	P	Q	H	R	E	R	I	V	L	V	G	F	R	R	D	L	N	L	K	A	D	F	T	L	R	D	I	S	E	C	F	P	A	Q	R	V	T
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.			.																															.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.			.																															.	.	.	.	.	.	.
Template Sequence		G	V	S	D	K	R	D	I	S	R	.	.	.	.	.	.	.	.	.	F	L	E	S	N	P	V	M	I	D	A	K	E	.	.	.	.	.	.	.	.	V	S	.	A	A	H	R	A	R	Y	F	W	G	N	L	P	G	M	N	R	P	L	A	S	T	V	N	D	K	L	E	L	Q	.	.	.	.	.	.	.
Template Known Secondary structure												.	.	.	.	.	.	.	.	.			T	S							G	G	G	.	.	.	.	.	.	.	.	T	S	.	S	B											T	T	S	S	S						S	S				S	G	G	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.			.																															.	.	.	.	.	.	.
Template SS confidence
		758	.	760	.	.	.	.	.	.	.										.	.	770	.	.	.	.	.	.	.	.	.	780									.	.		.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	L	L	D	P	M	V	E	A	K	Y	I	L	T	P	V	L	W	K	Y	L	Y	R	Y	A	K	K	H	Q	A	R	G	N	G	F	G	Y	G	M	V	Y	P	N	N	P	Q	S	V	T	R	T	L	S	A	R	Y	Y	K	D	G	A	E	I	L	I	D	R	G	W	D	M	A	T	G	E	K	D	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	L	E	H	G	R	I	A	K	F	S	K	V	R	Q	H	F	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S		T	T				S	S	S	S	B				S			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																	813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.			.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		D	D	P	L	N	Q	Q	H	R	P	R	R	L	T	P	R	E	C	A	R	L	M	G	F	E	A	P	G	E	A	K	F	R	I	P	V	.	.	S	D	T	Q	A	Y	R	Q	F	G	N	S	V	V	V	P	V	F	A	A	V	A	K	L	L	E	P	K
Query Conservation																																						.	.
Alig confidence		.	.	.	.																						.	.	.	.								.	.
Template Conservation		.	.	.	.																						.	.	.	.
Template Sequence		.	.	.	.	F	M	N	E	K	E	D	I	L	W	C	T	E	M	E	R	V	F	G	F	P	.	.	.	.	V	H	Y	T	D	V	S	N	M	S	R	L	A	R	Q	R	L	L	G	R	S	W	S	V	P	V	I	R	H	L	F	A	P	L	K	E	Y
Template Known Secondary structure		.	.	.	.			T	T															T			.	.	.	.	T	T	T	T			T	T												T	S											G	G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.																						.	.	.	.
Template SS confidence
						847	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.					.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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