Return to main results Retrieve Phyre Job Id

Job DescriptionP0AED9
Confidence39.89%DateThu Jan 5 11:23:06 GMT 2012
Rank285Aligned Residues144
% Identity21%Templatec2q41D_
PDB info PDB header:transferaseChain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100..... ....110.........120.........130. ....
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Query Sequence  LSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRGFES. IGGQCVFTSEWNKHAVRTYKANHYCD. . . . . . PATH
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Template Sequence  LTERDECAYQEXITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDXCEIDKXVVDVSKQFFPDVAIGYEDPRVN
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   136...140.........150.........160.........170.. .......180.........190.........200.........
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Query Sequence  HFNEDIRDITLSHKEGVSDEAAAEHIRQHIPEHDVLL. . . . . . AGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDV
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Template Sequence  LVIGDGVAFLKNAAEG. . . . . . . . . . . . . . . SYDAVIVDSSDPIGPAKELFEKPF. . . . . . . . . . . . . . . . . . . . . . . . F
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SSSGGGGGGS........................
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   178.180.........190... ......200.........210....... .
 
   210.........220.........230.........240.......
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Query Sequence  VRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDE
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Template Sequence  QSVARALRPGGVVCTQAESLWL. . HXDIIEDIVSNCRE
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   219220.........230.........240 .........250....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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