Job Description P0AED9 Confidence 99.96% Date Thu Jan 5 11:23:06 GMT 2012 Rank 13 Aligned Residues 155 % Identity 17% Template c2pv0A_ PDB info PDB header:transferase regulator Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 3-like; PDBTitle: dna methyltransferase 3 like protein (dnmt3l) Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	K	P	P	A	H	H	P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L	S	H	K	E	G	V	S	D
Query Conservation
Alig confidence																										.	.	.								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																										.	.	.								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		M	F	E	T	V	P	V	W	R	R	Q	P	V	R	V	L	S	L	F	E	D	I	K	K	.	.	.	E	L	T	S	L	G	F	.	.	.	L	E	S	G	S	D	P	G	Q	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	V	D	V	T	D	T	V	R	K	D	V	E	E	.	.	.
Template Known Secondary structure								G	G	G										S	S		T			.	.	.					T	T	S	.	.	.	S		S	S		S	S		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.			S			T	T									.	.	.
Template Predicted Secondary structure																										.	.	.								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.															220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		E	A	A	A	E	H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	S	L	A	G	V	S	K	K	N	S	L	G	R	A	H	G	F	A	C	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	A	R	R	P	A	.	.	.	.	.	.	.	M	F	V	L	E	N	V	K
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	W	G	P	F	D	L	V	Y	G	A	T	P	P	L	G	H	T	C	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	S	W	Y	L	F	Q	F	H	R	L	L	Q	Y	A	R	P	K	P	G	S	P	G	P	F	F	W	M	F	V	D	N	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T				S									S	S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	S			S	S			S										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	K	S	H	D	Q	G	K	T	F	R	I	I	M	Q	T	L	D	E	L	G	Y	D	V	A	D	A	E	D	N	G	P	D	D	P	K	I	I	D	G	K	H	F	L	P	Q	H	R	E	R	I	V	L	V	G	F	R	R	D	L	N	L	K	A	D	F	T	L	R
Query Conservation
Alig confidence				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		V	L	.	.	.	.	N	K	E	D	L	D	V	A	S	R	F	L	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	V	T	I	P	D	V	H	G	G	S	L	Q	N	A	V	R	V	W	S	N	I	.	P	A	I	R	S	R	H	W	A	L	V	S
Template Known Secondary structure			S	.	.	.	.												T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T												S	.	T	T	T	T	T	T			T	T	S
Template Predicted Secondary structure				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		289	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.															.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions