Job Description P0AED9 Confidence 73.66% Date Thu Jan 5 11:23:06 GMT 2012 Rank 229 Aligned Residues 94 % Identity 20% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.
Predicted Secondary structure																																													.																									.	.	.	.	.	.
Query SS confidence																																													.																									.	.	.	.	.	.
Query Sequence		L	S	E	K	E	F	A	H	L	Q	T	L	L	P	K	P	P	A	H	H	P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	.	I	G	G	Q	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	H	Y	.	.	.	.	.	.	C	D	P	A	T	H
Query Conservation																																													.																									.	.	.	.	.	.
Alig confidence																																													.																									.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	E	K	D	E	F	A	Y	H	E	M	M	T	H	V	P	M	T	V	S	K	E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N
Template Known Secondary structure				T	T	T																S	S	S										T	T									T		T	T									S																	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	N	E	D	I	R	D	I	T	L	S	H	K	E	G	V	S	D	E	A	A	A	E	H	I	R	Q	H	I	P	E	H	D	V	L	L
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	I	E	D	A	S	K	F	L	E	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	T	Y	D	V	I	I
Template Known Secondary structure					S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.																	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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