Job Description P0AED9 Confidence 95.23% Date Thu Jan 5 11:23:06 GMT 2012 Rank 114 Aligned Residues 100 % Identity 14% Template c2frxD_ PDB info PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		A	H	L	Q	T	L	L	P	K	P	P	A	H	H	P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	.	.	G	G	Q	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L
Query Conservation																																								.	.
Alig confidence																	.	.	.	.																				.	.																							.	.	.
Template Conservation																	.	.	.	.																																												.	.	.
Template Sequence		X	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	.	.	.	.	R	V	X	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	X	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	.	.	.	S	R	C	G	I	S	N	V	A	L	T	H	F	D	G
Template Known Secondary structure										T	T	T				S	.	.	.	.					S	S		T	T	S										T	T	T		S							S	S												.	.	.				T			S								S
Template Predicted Secondary structure																	.	.	.	.																																												.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	K	E	G	V	S	D	E	A	A	A	E	H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	S	L	A	G	V	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	F	G	A	A	V	P	.	.	.	.	.	.	.	.	.	.	.	E	X	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D
Template Known Secondary structure		T	T					S	T	.	.	.	.	.	.	.	.	.	.	.	T														G	G	G	G	G	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.												.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions