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Job DescriptionP0AED9
Confidence65.78%DateThu Jan 5 11:23:06 GMT 2012
Rank243Aligned Residues96
% Identity5%Templatec2cmgA_
PDB info PDB header:transferaseChain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120......... 130.........140.
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Query Sequence  SEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHY. . CDPATHHFNEDI
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Template Sequence  FKNFLHIESELLAHMGGCTKKELKEVLIVDGFDLELAHQLFKYD. THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHA
Template Known Secondary structure  GGGTTTSS


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GGGTTTSTTT
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   51........60.........70.........80.........90.... .....100.........110.........120.........
 
   142.......150.........160.........170......
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Query Sequence  RDITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFP
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Template Sequence  KQLLDLD. . . . . . . . . . . . . . . . IKKYDLIFCLQE
Template Known Secondary structure  SSGGGS
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   130...... ...140........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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