Email l.a.kelley@imperial.ac.uk Description P0A8B5 Date Thu Jan 5 11:07:23 GMT 2012 Unique Job ID 765cd998c5361baa

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1puga_ 99.9 100 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 2 d1j8ba_ 99.9 82 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 3 c1ybxA_ 99.9 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: conserved hypothetical protein cth-383 from clostridium thermocellum 4 c3f42A_ 99.9 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein hp0035; PDBTitle: crystal structure of uncharacterized protein hp0035 from helicobacter2 pylori 5 d1pugb_ 99.7 100 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 6 d1lr0a_ 78.2 11 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TolA 7 d2ba0g2 74.0 18 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 8 c2x9aB_ 67.8 17 PDB header:viral protein Chain: B: PDB Molecule:membrane spanning protein, required for outer membrane PDBTitle: crystal structure of g3p from phage if1 in complex with its2 coreceptor, the c-terminal domain of tola 9 d2nn6c2 64.4 9 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 10 d1tola2 61.1 17 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TolA 11 d2nn6e2 51.2 7 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 12 d2je6a2 48.6 9 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 13 d2nn6a2 46.4 15 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 14 c1xx3A_ 46.3 21 PDB header:transport protein Chain: A: PDB Molecule:tonb protein; PDBTitle: solution structure of escherichia coli tonb-ctd 15 c2v4uA_ 41.9 12 PDB header:ligase Chain: A: PDB Molecule:ctp synthase 2; PDBTitle: human ctp synthetase 2 - glutaminase domain in complex with2 5-oxo-l-norleucine 16 c3brcA_ 38.6 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein of unknown function; PDBTitle: crystal structure of a conserved protein of unknown function from2 methanobacterium thermoautotrophicum 17 d1oysa2 36.3 13 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 18 d2gskb1 30.7 21 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 19 c3h7fB_ 30.0 13 PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis 20 d1u07a_ 27.9 21 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 21 c2boiA_ not modelled 26.8 24 PDB header:lectin Chain: A: PDB Molecule:cv-iil lectin; PDBTitle: 1.1a structure of chromobacterium violaceum lectin cv2l in2 complex with alpha-methyl-fucoside 22 d2chha1 not modelled 26.4 16 Fold:Calcium-mediated lectin Superfamily:Calcium-mediated lectin Family:Calcium-mediated lectin 23 c2vnvC_ not modelled 26.4 21 PDB header:sugar-binding protein Chain: C: PDB Molecule:bcla; PDBTitle: crystal structure of bcla lectin from burkholderia2 cenocepacia in complex with alpha-methyl-mannoside at 1.73 angstrom resolution 24 d1uzva_ not modelled 24.1 20 Fold:Calcium-mediated lectin Superfamily:Calcium-mediated lectin Family:Calcium-mediated lectin 25 c2grxC_ not modelled 23.8 21 PDB header:metal transport Chain: C: PDB Molecule:protein tonb; PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome 26 d1ib8a2 not modelled 23.7 8 Fold:Alpha-lytic protease prodomain-like Superfamily:YhbC-like, N-terminal domain Family:YhbC-like, N-terminal domain 27 c1udsA_ not modelled 22.1 13 PDB header:transferase Chain: A: PDB Molecule:ribonuclease ph; PDBTitle: crystal structure of the trna processing enzyme rnase ph r126a mutant2 from aquifex aeolicus 28 c2xr4A_ not modelled 22.1 24 PDB header:sugar binding protein Chain: A: PDB Molecule:lectin; PDBTitle: c-terminal domain of bc2l-c lectin from burkholderia cenocepacia 29 c2kzxA_ not modelled 21.9 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of a3dht5 from clostridium thermocellum,2 northeast structural genomics consortium target cmr116 30 c3nvaB_ not modelled 21.6 21 PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: dimeric form of ctp synthase from sulfolobus solfataricus 31 c3b4tC_ not modelled 21.5 6 PDB header:transferase Chain: C: PDB Molecule:ribonuclease ph; PDBTitle: crystal structure of mycobacterium tuberculosis rnase ph, the2 mycobacterium tuberculosis structural genomics consortium target3 rv1340 32 c3o6uB_ not modelled 20.7 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein cpe2226; PDBTitle: crystal structure of cpe2226 protein from clostridium perfringens.2 northeast structural genomics consortium target cpr195 33 c2b1kA_ not modelled 20.7 11 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe; PDBTitle: crystal structure of e. coli ccmg protein 34 c2npbA_ not modelled 20.4 24 PDB header:oxidoreductase Chain: A: PDB Molecule:selenoprotein w; PDBTitle: nmr solution structure of mouse selw 35 c2k9kA_ not modelled 20.3 12 PDB header:metal transport Chain: A: PDB Molecule:tonb2; PDBTitle: molecular characterization of the tonb2 protein from vibrio2 anguillarum 36 c2owyB_ not modelled 19.8 12 PDB header:dna binding protein Chain: B: PDB Molecule:recombination-associated protein rdgc; PDBTitle: the recombination-associated protein rdgc adopts a novel toroidal2 architecture for dna binding 37 c1ib8A_ not modelled 18.4 8 PDB header:nucleic acid binding protein Chain: A: PDB Molecule:conserved protein sp14.3; PDBTitle: solution structure and function of a conserved protein2 sp14.3 encoded by an essential streptococcus pneumoniae3 gene 38 c3eytA_ not modelled 17.8 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein spoa0173; PDBTitle: crystal structure of thioredoxin-like superfamily protein spoa0173 39 c3dd6A_ not modelled 17.4 20 PDB header:transferase Chain: A: PDB Molecule:ribonuclease ph; PDBTitle: crystal structure of rph, an exoribonuclease from bacillus2 anthracis at 1.7 a resolution 40 d2fqla1 not modelled 16.7 10 Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like 41 d1ihra_ not modelled 16.3 24 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 42 d2ga5a1 not modelled 16.0 10 Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like 43 c2pnzB_ not modelled 15.9 18 PDB header:hydrolase/hydrolase Chain: B: PDB Molecule:probable exosome complex exonuclease 2; PDBTitle: crystal structure of the p. abyssi exosome rnase ph ring2 complexed with udp and gmp 44 c1r6mA_ not modelled 15.7 11 PDB header:transferase Chain: A: PDB Molecule:ribonuclease ph; PDBTitle: crystal structure of the trna processing enzyme rnase ph from2 pseudomonas aeruginosa in complex with phosphate 45 d1e2ya_ not modelled 15.2 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 46 c1x2gB_ not modelled 14.3 14 PDB header:ligase Chain: B: PDB Molecule:lipoate-protein ligase a; PDBTitle: crystal structure of lipate-protein ligase a from2 escherichia coli 47 c2nn6C_ not modelled 14.1 11 PDB header:hydrolase/transferase Chain: C: PDB Molecule:exosome complex exonuclease rrp43; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 48 d1neia_ not modelled 13.6 18 Fold:Hypothetical protein YoaG Superfamily:Hypothetical protein YoaG Family:Hypothetical protein YoaG 49 c2nn6E_ not modelled 12.4 5 PDB header:hydrolase/transferase Chain: E: PDB Molecule:exosome complex exonuclease rrp42; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 50 c1vqzA_ not modelled 12.0 19 PDB header:ligase Chain: A: PDB Molecule:lipoate-protein ligase, putative; PDBTitle: crystal structure of a putative lipoate-protein ligase a (sp_1160)2 from streptococcus pneumoniae tigr4 at 1.99 a resolution 51 d1vqza1 not modelled 12.0 18 Fold:SufE/NifU Superfamily:SufE/NifU Family:SP1160 C-terminal domain-like 52 c2z7eB_ not modelled 11.1 8 PDB header:biosynthetic protein Chain: B: PDB Molecule:nifu-like protein; PDBTitle: crystal structure of aquifex aeolicus iscu with bound [2fe-2 2s] cluster 53 c2qzbB_ not modelled 10.8 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein yfey; PDBTitle: crystal structure of the uncharacterized protein yfey from escherichia2 coli 54 c2wnrC_ not modelled 9.8 9 PDB header:hydrolase Chain: C: PDB Molecule:probable exosome complex exonuclease 2; PDBTitle: the structure of methanothermobacter thermautotrophicus2 exosome core assembly 55 c2wp8A_ not modelled 9.7 16 PDB header:hydrolase Chain: A: PDB Molecule:exosome complex component rrp45; PDBTitle: yeast rrp44 nuclease 56 d1xvqa_ not modelled 9.3 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 57 d1we0a1 not modelled 9.2 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 58 c2vzkD_ not modelled 8.7 23 PDB header:transferase Chain: D: PDB Molecule:glutamate n-acetyltransferase 2 beta chain; PDBTitle: structure of the acyl-enzyme complex of an n-terminal2 nucleophile (ntn) hydrolase, oat2 59 c1vraB_ not modelled 8.7 26 PDB header:transferase Chain: B: PDB Molecule:arginine biosynthesis bifunctional protein argj; PDBTitle: crystal structure of arginine biosynthesis bifunctional protein argj2 (10175521) from bacillus halodurans at 2.00 a resolution 60 c2ad5B_ not modelled 8.0 27 PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution. 61 d1zofa1 not modelled 8.0 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 62 c1zyeL_ not modelled 7.8 15 PDB header:oxidoreductase Chain: L: PDB Molecule:thioredoxin-dependent peroxide reductase; PDBTitle: crystal strucutre analysis of bovine mitochondrial peroxiredoxin iii 63 d2cv4a1 not modelled 7.8 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 64 c3fw2A_ not modelled 7.7 16 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: c-terminal domain of putative thiol-disulfide oxidoreductase from2 bacteroides thetaiotaomicron. 65 c1jcgA_ not modelled 7.5 8 PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp 66 c3uowB_ not modelled 7.3 19 PDB header:ligase Chain: B: PDB Molecule:gmp synthetase; PDBTitle: crystal structure of pf10_0123, a gmp synthetase from plasmodium2 falciparum 67 c1s94A_ not modelled 7.3 11 PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:s-syntaxin; PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei 68 d1s94a_ not modelled 7.3 11 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 69 d1k28d2 not modelled 7.1 38 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like 70 c3h2dA_ not modelled 7.1 12 PDB header:signaling protein Chain: A: PDB Molecule:chec-like superfamily protein; PDBTitle: crystal structure of a chemotactic chec-like protein (so_3915) from2 shewanella oneidensis mr-1 at 1.86 a resolution 71 c2bmxB_ not modelled 7.1 6 PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxidase c; PDBTitle: mycobacterium tuberculosis ahpc 72 d1m98a2 not modelled 7.1 29 Fold:Cystatin-like Superfamily:NTF2-like Family:Orange carotenoid protein, C-terminal domain 73 c3lorB_ not modelled 6.8 15 PDB header:isomerase Chain: B: PDB Molecule:thiol-disulfide isomerase and thioredoxins; PDBTitle: the crystal structure of a thiol-disulfide isomerase from2 corynebacterium glutamicum to 2.2a 74 d2r7ka2 not modelled 6.7 16 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:PurP ATP-binding domain-like 75 d1z5ye1 not modelled 6.7 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 76 c1tolA_ not modelled 6.7 14 PDB header:viral protein Chain: A: PDB Molecule:protein (fusion protein consisting of minor coat PDBTitle: fusion of n-terminal domain of the minor coat protein from2 gene iii in phage m13, and c-terminal domain of e. coli3 protein-tola 77 d1n8ja_ not modelled 6.6 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 78 d3cdda1 not modelled 6.6 7 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like 79 c3ghhA_ not modelled 6.5 40 PDB header:hydrolase Chain: A: PDB Molecule:ecto-nad+ glycohydrolase (cd38 molecule); PDBTitle: structural insights into the catalytic mechanism of cd38:2 evidence for a conformationally flexible covalent enzyme-3 substrate complex. 80 c3eukC_ not modelled 6.4 13 PDB header:cell cycle Chain: C: PDB Molecule:chromosome partition protein mukb, linker; PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head2 domain)-atpgammas complex, asymmetric dimer 81 c3kebB_ not modelled 6.3 15 PDB header:oxidoreductase Chain: B: PDB Molecule:probable thiol peroxidase; PDBTitle: thiol peroxidase from chromobacterium violaceum 82 c2kxxA_ not modelled 6.2 20 PDB header:protein binding Chain: A: PDB Molecule:small protein a; PDBTitle: nmr structure of escherichia coli bame, a lipoprotein component of the2 beta-barrel assembly machinery complex 83 d1x2ga1 not modelled 6.2 13 Fold:SufE/NifU Superfamily:SufE/NifU Family:SP1160 C-terminal domain-like 84 d1knga_ not modelled 5.9 6 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 85 c3mxnA_ not modelled 5.9 20 PDB header:replication Chain: A: PDB Molecule:recq-mediated genome instability protein 1; PDBTitle: crystal structure of the rmi core complex 86 c2br2G_ not modelled 5.8 9 PDB header:hydrolase Chain: G: PDB Molecule:exosome complex exonuclease 2; PDBTitle: rnase ph core of the archaeal exosome 87 d1yexa1 not modelled 5.8 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 88 c3it4B_ not modelled 5.7 26 PDB header:transferase Chain: B: PDB Molecule:arginine biosynthesis bifunctional protein argj PDBTitle: the crystal structure of ornithine acetyltransferase from2 mycobacterium tuberculosis (rv1653) at 1.7 a 89 d1qmva_ not modelled 5.7 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 90 d1l4sa_ not modelled 5.7 7 Fold:Ribosome binding protein Y (YfiA homologue) Superfamily:Ribosome binding protein Y (YfiA homologue) Family:Ribosome binding protein Y (YfiA homologue) 91 c3fw6A_ not modelled 5.5 15 PDB header:hydrolase Chain: A: PDB Molecule:cellulase; PDBTitle: crystal structure of celm2, a bifunctional glucanase-2 xylanase protein from a metagenome library 92 d1yuwa1 not modelled 5.2 20 Fold:Heat shock protein 70kD (HSP70), peptide-binding domain Superfamily:Heat shock protein 70kD (HSP70), peptide-binding domain Family:Heat shock protein 70kD (HSP70), peptide-binding domain 93 d1kn0a_ not modelled 5.1 23 Fold:dsRBD-like Superfamily:dsRNA-binding domain-like Family:The homologous-pairing domain of Rad52 recombinase