Job Description P36659 Confidence 35.47% Date Thu Jan 5 11:53:32 GMT 2012 Rank 71 Aligned Residues 103 % Identity 22% Template c3orjA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:sugar-binding protein; PDBTitle: crystal structure of a sugar-binding protein (bacova_04391) from2 bacteroides ovatus at 2.16 a resolution Resolution 2.16 Å

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		164	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																.	.	.																																								.
Query SS confidence				.	.	.	.																																.	.	.																																								.
Query Sequence		I	P	.	.	.	.	A	G	V	G	N	G	Q	R	I	R	L	K	G	Q	G	T	P	G	E	N	G	G	P	N	G	D	L	W	L	V	I	.	.	.	H	I	A	P	H	P	L	F	D	I	V	G	Q	D	L	E	I	V	V	P	V	S	P	W	E	A	A	L	G	A	K	V	T	V	P	T	L	K	E	.
Query Conservation				.	.	.	.																																.	.	.																																								.
Alig confidence				.	.	.	.																																.	.	.																.	.	.	.																					.
Template Conservation																																																									.	.	.	.
Template Sequence		V	P	D	R	L	V	D	F	A	R	L	G	Q	L	I	R	I	E	G	E	G	F	N	G	L	K	K	V	Y	I	N	G	Y	N	C	Y	F	N	P	V	F	V	S	N	K	S	F	L	V	S	V	N	S	K	V	.	.	.	.	P	T	T	E	A	D	E	N	V	R	N	T	I	R	L	V	K	D	G	G	E
Template Known Secondary structure		S	S					S				T	T											T	T							T	T					B		G	G	G			S	S								T	T		.	.	.	.		S	T	T	S		T	T	T	T	T							T	T
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
					236	.	.	.	240	.	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.								.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.								.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	S	I	L	L	T	I	P	.	.	.	.	.	.	.	.	.	P	G	S	Q	A	G	Q	R	L	R	V	K	G	K	G	L	V	S	K	K	Q	T	G	D	L	Y	A	V	L	K	I	V	M	P	P	K	P
Query Conservation		.	.	.								.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	Y	D	F	Q	I	R	A	A	A	P	S	I	T	K	I	S	N	C	X	P	N	V	G	E	P	I	I	V	Y	G	S	G	L	T	E	I	A	.	.	.	.	.	.	.	.	.	K	V	V	F	P	G	N	V
Template Known Secondary structure											S								S		S	S			T	T											T	T			.	.	.	.	.	.	.	.	.					T	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions