Job Description P36659 Confidence 100.00% Date Thu Jan 5 11:53:32 GMT 2012 Rank 3 Aligned Residues 167 % Identity 23% Template c2qldA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 1; PDBTitle: human hsp40 hdj1 Resolution 2.70 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	I	E	I	E	V	A	V	F	L	E	E	T	L	T	E	H	K	R	T	I	S	Y	N	L	P	V	Y	N	A	F	G	M	I	E	Q	E	I	P	K	T	L	N	V	K	I	P	A	G	V	G	N	G	Q	R	I	R	L	K	G	Q	G	T	P	G	E	N	G	G	P	N	G	D	L	W	L	V	I	H
Query Conservation
Alig confidence																																																																		.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		P	P	V	T	H	D	L	R	V	S	L	E	E	I	Y	S	G	C	T	K	K	M	K	I	S	H	K	R	L	N	P	D	G	K	S	I	R	N	E	D	K	I	L	T	I	E	V	K	K	G	W	K	E	G	T	K	I	T	F	P	K	E	G	D	.	.	.	.	Q	T	I	P	A	D	I	V	F	V	L	K
Template Known Secondary structure																															T	T	T	S	S															T	T			T	T						T	T		S		.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																									.																									.	.	.
Query SS confidence																																									.																									.	.	.
Query Sequence		I	A	P	H	P	L	F	D	I	V	G	Q	D	L	E	I	V	V	P	V	S	P	W	E	A	A	L	G	A	K	V	T	V	P	T	L	K	E	S	.	I	L	L	T	I	P	P	G	S	Q	A	G	Q	R	L	R	V	K	G	K	G	L	V	S	.	.	.	K	K	Q	T	G	D	L	Y	A	V	L	K	I
Query Conservation																																									.																									.	.	.
Alig confidence																																									.																									.	.	.
Template Conservation
Template Sequence		D	K	P	H	N	I	F	K	R	D	G	S	D	V	I	Y	P	A	R	I	S	L	R	E	A	L	C	G	C	T	V	N	V	P	T	L	D	G	R	T	I	P	V	V	F	K	D	V	I	R	P	G	M	R	R	K	V	P	G	E	G	L	P	L	P	K	T	P	E	K	R	G	D	L	I	I	E	F	E	V
Template Known Secondary structure						S	S					T	T																								T	T	S									S				T	T						T	T		S		B		S	S		T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	P	P	K	P	D	E	N	T	A	A	L	W	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	P	E	R	I	P	Q	T	S	R	T	V	L	E
Template Known Secondary structure					S										T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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