Job Description P36659 Confidence 100.00% Date Thu Jan 5 11:53:32 GMT 2012 Rank 4 Aligned Residues 174 % Identity 22% Template c1nltA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:mitochondrial protein import protein mas5; PDBTitle: the crystal structure of hsp40 ydj1 Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	H	A	R	Q	S	R	Q	R	P	A	T	R	G	H	D	I	E	I	E	V	.	.	.	.	.	.	.	.	.	A	V	F	L	E	E	T	L	T	E	H	K	R	T	I	S	Y	N	L	P	V	Y	N	A	F	G	M	I	E	Q	E	I	P	K	T	L	N	V	K	I	P	A	G	V	G	N	G	Q	R
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	K	K	G	A	V	K	K	C	T	S	C	N	G	Q	G	I	K	F	V	T	R	Q	M	G	P	M	I	Q	R	F	Q	T	E	C	D	V	C	H	G	T	G	D	I	I	D	P	K	D	R	C	K	S	C	N	G	K	K	V	E	N	E	R	K	I	L	E	V	H	V	E	P	G	M	K	D	G	Q	R
Template Known Secondary structure		S	B	S	T	T	T					T	T	S	S	S	S	S								S	S	S								S		T	T		S	S	S	S	S				T	T	S	B		S	S	S	T	T	S															T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.			.	.	.	.	.	250
Predicted Secondary structure																																																																	.									.	.
Query SS confidence																																																																	.									.	.
Query Sequence		I	R	L	K	G	Q	G	T	P	G	E	N	G	G	P	N	G	D	L	W	L	V	I	H	I	A	P	H	P	L	F	D	I	V	G	Q	D	L	E	I	V	V	P	V	S	P	W	E	A	A	L	G	A	K	V	T	V	P	T	L	K	E	S	.	I	L	L	T	I	P	P	G	.	.	S	Q	A	G	Q	R
Query Conservation																																																																	.									.	.
Alig confidence													.																																																				.									.	.
Template Conservation													.
Template Sequence		I	V	F	K	G	E	A	D	Q	A	P	.	D	V	I	P	G	D	V	V	F	I	V	S	E	R	P	H	K	S	F	K	R	D	G	D	D	L	V	Y	E	A	E	I	D	L	L	T	A	I	A	G	G	E	F	A	L	E	H	V	S	G	D	W	L	K	V	G	I	V	P	G	E	V	I	A	P	G	M	R
Template Known Secondary structure					T	T		S				T	.	T		B														S	S					T	T																	B							S	S	S							B		T	T	T	T		S	T	T
Template Predicted Secondary structure													.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		L	R	V	K	G	K	G	L	V	S	K	K	.	.	Q	T	G	D	L	Y	A	V	L	K	I	V	M	P	P
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		K	V	I	E	G	K	G	M	P	I	P	K	Y	G	G	Y	G	N	L	I	I	K	F	T	I	K	D	P	E
Template Known Secondary structure					T	T		S		B		S	S	S		S	B
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions