Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8A8
Confidence82.97%DateThu Jan 5 11:07:21 GMT 2012
Rank7Aligned Residues38
% Identity13%Templated1th7a1
SCOP infoSm-like fold Sm-like ribonucleoproteins Sm motif of small nuclear ribonucleoproteins, SNRNP
Resolution1.68

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120..
Predicted Secondary structure 


















Query SS confidence 












































Query Sequence  SPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDG
Query Conservation 


  


     
 
  
  
 
 
           
 
     
Alig confidence 







...















....













Template Conservation        
 ...  
     
 
 
 
 .... 
    
 
   
 
Template Sequence  NFLAETAH. . . KVLAESLNNLVLVKLK. . . . GNKEVRGMLRSYDQ
Template Known Secondary structure 
TT
...TTST....TT
T
Template Predicted Secondary structure 





...



....




Template SS confidence 












































   4.....10. ........20....... ..30.........40.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions