Job Description P75726 Confidence 99.95% Date Thu Jan 5 12:13:30 GMT 2012 Rank 23 Aligned Residues 208 % Identity 20% Template d2ahua1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like CoA transferase beta subunit-like Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	I	A	R	S	A	A	D	V	I	V	N	S	G	Y	F	K	E	G	F	S	M	Q	T	G	T	G	G	A	S	L	A	V	T	R	F	L	E	D	K	M	R	S	R	D	I	R	A	D	F	A	L	G	G	I	T	A	T	M	V	D	L	H	E	K	G	L	I	R	K	L	L	D	V	Q	S	F	D	S
Query Conservation
Alig confidence																														.														.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																														.														.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		L	P	L	N	Q	R	K	L	V	A	R	R	A	L	F	E	X	R	K	G	A	V	G	N	V	G	V	G	.	I	A	D	G	I	G	L	V	A	R	E	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	D	D	F	I	L	T	V	E	T	G	P	I	G	G	I	T	S	G	A	N	V	.	.
Template Known Secondary structure																T	T			T	T							S	S	.	T	T	T	T									T	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S			B		T	T	S			S		B						B	.	.
Template Predicted Secondary structure																														.														.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.														.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	A	Q	S	L	A	R	N	P	N	H	I	E	I	S	A	N	Q	Y	A	N	W	G	S	K	G	A	S	V	D	R	L	D	V	V	V	L	S	A	L	E	I	D	T	Q	F	N	V	N	V	L	T	G	S	D	G	V	L	R	G	A	S	G	G	H	C	D	T	A	I	A	S	A	L	S	I	I	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																				.	.	.	.																							.				.
Template Conservation		.	.	.	.	.	.	.	.	.																				.	.	.	.																							.				.
Template Sequence		.	.	.	.	.	.	.	.	.	N	T	R	A	I	L	D	X	T	S	Q	F	D	F	Y	H	G	G	G	.	.	.	.	L	D	V	C	Y	L	S	F	A	E	V	D	Q	H	G	N	V	G	V	H	K	F	.	N	G	K	.	I	X	G	T	G	G	F	I	D	I	S	A	T	S	K	K	I	I	F	C	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S		S														T	T		.	.	.	.		S							S				T	T	S					S			.	T	T		.					T	T						T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																				.	.	.	.																							.				.
Template SS confidence
											352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370					.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		412	.	.	.	.	.	.																		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.							.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		P	L	V	R	G	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	L	V	D	N	V	L	T	C	I	T	P	G	S	S	.	.	.	.	.	.	V	D	I	L	V	T	D	H	G	I	A	V	N	P	A	R	P	E	L	A	E	R	L	Q	E	A	G	I	K	V	V	S	I	E
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	T	A	G	S	L	K	T	E	I	A	D	G	K	L	N	I	V	Q	E	G	R	V	K	K	F	I	R	E	L	P	E	I	T	F	S	G	K	I	A	L	E	R	G	L	D	V	R	Y	I	T	E	R	A	V	.	.	.	.	.	.	.	.	.	.	F	T	L	K	E	D	G	L	H	L	I	E	I	A
Template Known Secondary structure			S			S	S							S	S									S			S			S			S	S		S	B								T	T								S	S			.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.											.	.	.	.	.	.	.	480	.	.	.	.	.	.
					469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	W	L	R	E	R	A	R	L	L	T	G	E	P	Q	P	I	E	F	T	D	R	V	V	A	V	V	R	Y	R	D	G	S
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		P	G	V	D	L	Q	K	D	I	L	D	K	X	D	F	T	P	V	I	S	P	E	L	K	L	X	D	E	R	L	F	I	D	A	A
Template Known Secondary structure		T	T							T	G	G	G	S	S	S													G	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions