|   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | E | A | I | R | R | S | G | L | Q | D | G | M | T | V | S | F | H | H | A | F | R | G | G | D | L | T | V | N | M | V | M | D | V | I | A | K | M | . |
. |
. |
G | F | K | N | L | T | L | A | S | S | S | L | S | D | C | H | A | P | L | V | E | H | I | R | Q | G | V | V | T | R | I | Y | T | S | G | L | R | G |
Query Conservation |   |
  |   |
|
|   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |   |   | . | . |
|   |
|
|   |   |
|
|
|
|
|
|
| . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
G | V | R | A | A | Q | Y | . |
. |
V | E | D | G | M | I | V | G | L | G | T | G | S | . |
. |
. |
. |
. |
T | A | Y | Y | F | V | E | E | V | G | R | R | V | Q | E | E | G | L | Q | V | I | G | V | T | T | S | S | R | T | T | A | Q | A | Q | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  | G | G | G | . | . |
|
| T | T |  |  |  |  |  |
|
| S | T | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | |
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | A | E | E | I | S | R | G | L | L | A | E | P | V | Q | I | H | S | H | G | G | R | V | H | L | V | Q | S | G | E | L | N | I | D | V | A | F | L | G | V | P | S | C | D | E | F | G | N | A | N | G | Y | T | G | K | A | C | C | G | S | L | G | Y | A | I | V | D | A | D | N | A | K | Q | V | V | M | L | T | E |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   | . |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|   | . | . | . | . |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | G | I | P | L | K | S | I | D | E | . |
V | D | S | V | D | V | T | V | D | G | A | D | E | V | D | P | N | F | N | G | I | K | G | G | G | G | . |
. |
. |
. |
A | L | L | M | E | K | I | V | G | T | L | T | K | D | Y | I | W | V | V | D |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  | T |
|
| B |
|
| G | G | G | . |
| S |
|  |  |  |  |  |  |
|
| S |  |  |
| T | T | S |
|  |  |
|
| T | T | S | . | . | . | . |
|  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
64 | . | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
  |   |
207 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
E |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
E |
Template Known Secondary structure |   |
G |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
120 |
  |