Job Description P75726 Confidence 100.00% Date Thu Jan 5 12:13:30 GMT 2012 Rank 9 Aligned Residues 361 % Identity 26% Template c3d3uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: crystal structure of 4-hydroxybutyrate coa-transferase (abft-2) from2 porphyromonas gingivalis. northeast structural genomics consortium3 target pgr26 Resolution 2.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		E	K	A	R	D	R	K	L	C	A	N	L	E	E	A	.	I	R	R	S	G	L	Q	D	G	M	T	V	S	F	H	H	A	F	R	G	G	D	L	T	V	N	M	V	M	D	V	I	A	K	M	G	F	K	N	L	T	L	A	S	S	S	L	S	D	C	H	A	P	L	V	E	H	I	R	Q	G	V	V	T
Query Conservation																	.
Alig confidence																	.				.	.																														.	.								.	.	.	.															.	.	.
Template Conservation																					.	.																														.	.								.	.	.	.															.	.	.
Template Sequence		W	Q	E	L	Y	R	Q	R	V	C	S	A	D	E	A	V	V	D	S	.	.	L	K	P	G	T	K	V	V	F	G	H	A	A	A	A	P	V	R	F	S	Q	A	M	Y	R	Q	R	E	K	.	.	L	E	N	I	T	V	F	.	.	.	.	H	M	L	Y	F	G	D	A	P	H	L	A	P	E	.	.	.
Template Known Secondary structure										B											.	.			T	T								B	T	T												T	T	T	T	.	.			S					.	.	.	.		S		B	S	S			T	T	S	S	G	G	.	.	.
Template Predicted Secondary structure																					.	.																														.	.								.	.	.	.															.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Y	T	S	G	L	R	G	P	L	A	E	E	I	S	R	G	L	L	A	E	P	V	Q	I	H	S	H	G	G	R	V	H	L	V	Q	S	G	E	L	N	I	D	V	A	F	L	G	V	P	S	C	D	E	F	G	N	A	N	G	Y	T	G	K	A	C	C	G	S	L	G	Y	A	I	V	D	A	D	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																													.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	S	H	V	H	P	T	L	C	H	F	H	E	.	.	V	P	E	L	F	R	Q	G	F	F	P	L	D	V	A	V	V	Q	V	S	T	P	N	E	E	G	Y	C	.	.	.	.	.	.	S	F	G	V	S	C	D	Y	T	K	A	A	A	E	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	T								G	G	G	.	.						T	T	S	S	S			S											T	T	S			.	.	.	.	.	.			T	T	B		B	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																													.	.	.	.	.	.
Template SS confidence
																	72	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q	V	V	M	L	T	E	E	L	L	P	Y	P	H	N	P	A	S	I	E	Q	D	Q	V	D	L	I	V	K	V	D	R	V	G	D	A	A	K	I	G	A	G	A	T	R	M	T	T	N	P	R	E	L	L	I	A	R	S	A	A	D	V	I	V	N	S	G	Y	F	K	E	G	F	S	M	Q	T	G
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		A	P	V	V	V	A	E	V	N	K	Q	M	P	F	I	G	G	E	N	L	I	H	I	S	K	L	T	H	I	I	E	V	D	E	P	I	.	.	.	.	.	.	.	.	A	E	V	L	P	G	S	D	L	E	L	R	I	G	Q	N	C	A	S	L	I	.	.	.	.	.	.	K	D	G	D	T	L	Q	L	G
Template Known Secondary structure			S								S	S	S						S					G	G	G		S										.	.	.	.	.	.	.	.																			T	T		.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.									.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.										.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.
Query Sequence		T	G	G	A	S	L	A	V	T	R	F	L	E	D	K	M	R	S	R	D	I	R	A	D	F	A	L	G	G	I	T	A	T	M	V	D	L	H	E	K	G	L	I	R	K	L	L	D	.	.	.	.	.	.	.	.	.	V	Q	S	F	D	S	H	A	A	Q	S	L	A	R	N	P	N	H	I	E	I	S	A
Query Conservation																																																		.	.	.	.	.	.	.	.	.
Alig confidence																	.										.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																	.										.	.	.	.
Template Sequence		I	G	G	I	P	D	A	V	L	R	A	L	E	G	H	.	K	D	L	G	I	H	T	E	M	.	.	.	.	F	T	D	G	V	M	R	M	I	R	K	G	I	I	N	G	K	K	K	T	L	H	P	E	K	V	V	T	S	L	I	F	G	S	K	E	L	Y	D	F	V	N	N	N	P	V	I	E	C	Y	P
Template Known Secondary structure		S	S									T	T	T	T		.		S	B					S		.	.	.	.	B											T		B			S	S		S	S	S	T	T	S				S	B	B											T	T		T	T					B
Template Predicted Secondary structure																	.										.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.						.	.	410	.	.	.	.			.	.	.	.	.	420	.
Predicted Secondary structure																																																													.	.	.	.	.								.	.
Query SS confidence																																																													.	.	.	.	.								.	.
Query Sequence		N	Q	Y	A	N	W	G	S	K	G	A	S	V	D	R	L	D	V	V	V	L	S	A	L	E	I	D	T	Q	F	N	V	N	V	L	T	G	S	D	G	V	L	R	G	A	S	G	G	H	C	D	T	A	I	A	S	A	L	S	.	.	.	.	.	I	I	V	A	P	L	V	.	.	R	G	R	I	P	T	L
Query Conservation																																																													.	.	.	.	.								.	.
Alig confidence													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.								.	.
Template Conservation													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	Y	I	N	N	P	D	V	I	G	.	K	N	D	R	M	V	S	I	N	S	C	L	E	M	D	L	M	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Q	V	D	F	L	R	G	A	K	R	S	K	G	G	I	S	I	M	A	F	P	S	T	A	K	K	G	T	E	S	R	I
Template Known Secondary structure						T							.		S	S	S								S				T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S	T	T									S			T	T	T	T			S
Template Predicted Secondary structure													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.																.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.							.	.	470	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence		V	D	N	V	L	T	C	I	T	P	G	S	S	V	D	I	L	V	T	D	H	G	I	A	V	N	P	A	R	P	E	L	A	E	R	L	Q	E	A	G	I	K	V	V	S	I	.	.	.	.	.	.	E	W	L	R	E	R	A	R	L
Query Conservation																																																.	.	.	.	.	.
Alig confidence				.	.	.																				.														.	.	.	.					.	.	.	.	.	.
Template Conservation				.	.	.																				.														.	.	.	.
Template Sequence		V	P	.	.	.	I	L	K	T	G	R	N	E	V	D	Y	V	V	T	E	Y	G	V	A	.	R	L	R	G	A	T	L	R	Q	R	A	E	A	.	.	.	.	L	T	A	I	A	H	P	D	F	R	P	A	L	E	E	E	I	R	R
Template Known Secondary structure			S	.	.	.	S					S	T	T		S					T	T				.			T	T										.	.	.	.					S		T	T											T
Template Predicted Secondary structure				.	.	.																				.														.	.	.	.
Template SS confidence
		370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.					.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.