Job Description P75726 Confidence 100.00% Date Thu Jan 5 12:13:30 GMT 2012 Rank 11 Aligned Residues 406 % Identity 18% Template c2ahvC_ PDB info PDB header:transferase Chain: C: PDB Molecule:putative enzyme ydif; PDBTitle: crystal structure of acyl-coa transferase from e. coli o157:h7 (ydif)-2 thioester complex with coa- 1 Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																								.													.	.
Query SS confidence																										.	.	.																								.													.	.
Query Sequence		D	R	K	L	C	A	N	L	E	E	A	I	R	R	S	G	L	Q	D	G	M	T	V	S	.	.	.	F	H	H	A	F	R	G	G	D	L	T	V	N	M	V	M	D	V	I	A	K	M	G	.	F	K	N	L	T	L	A	S	S	S	L	S	.	.	D	C	H	A	P	L	V	E	H	I	R	Q	G	V	V
Query Conservation																										.	.	.																								.													.	.
Alig confidence							.									.	.									.	.	.																								.													.	.
Template Conservation							.									.	.
Template Sequence		R	V	P	V	L	.	S	A	Q	E	A	V	N	Y	.	.	I	P	D	E	A	T	L	C	V	L	G	A	G	G	G	I	L	E	A	T	T	L	I	T	A	L	A	D	K	Y	K	Q	T	Q	T	P	R	N	L	S	I	I	S	P	T	G	L	G	D	R	A	D	R	G	I	S	P	L	A	Q	E	G	L	V
Template Known Secondary structure					B		.							T	T	.	.			T	T									B	T	T	T	T																			S		S						S	S			B	S	S	S	S	S	T	T	G	G	G			B	T	T
Template Predicted Secondary structure							.									.	.
Template SS confidence
		12	.	.	.	.		.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		117	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																																																	140	.	.	.	.	.	.
Predicted Secondary structure								.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	I	Y	T	S	.	.	G	L	R	G	P	L	A	E	E	I	S	R	G	L	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	Q	I	H	S	H
Query Conservation								.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	W	A	L	C	G	H	W	G	Q	S	P	R	I	S	D	L	A	E	Q	N	K	I	I	A	Y	N	Y	P	Q	G	V	L	T	Q	T	L	R	A	A	A	A	H	Q	P	G	I	I	S	D	I	G	I	G	T	F	V	D	P	R	Q	Q	G	G	K	L	N	E	V	T	K	E	D	L	I	K	L	V	E	F
Template Known Secondary structure							S			T	T	S									T	T	S	S																			T	T								T	T	T	T	S	T	T	S	T	T	T	T	T	T	B		S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		G	G	R	V	H	L	V	Q	S	G	E	L	N	I	D	V	A	F	L	G	V	P	S	C	D	E	F	G	N	A	N	G	Y	T	G	K	A	C	C	G	S	L	G	Y	A	I	V	D	A	D	N	A	K	Q	V	V	M	L	T	E	E	L	L	P	.	.	.	Y	P	H	N	P	A	S	I	E	Q	D	Q	V
Query Conservation																																																																		.	.	.
Alig confidence											.																																																							.	.	.
Template Conservation											.
Template Sequence		D	N	K	E	Y	L	Y	Y	K	.	A	I	A	P	D	I	A	F	I	R	A	T	T	C	D	S	E	G	Y	A	T	F	E	D	E	V	M	Y	L	D	A	L	V	I	A	Q	A	V	H	N	N	G	G	I	V	M	M	Q	V	Q	K	M	V	K	K	A	T	L	H	P	K	S	V	R	I	P	G	Y	L	V
Template Known Secondary structure		T	T								.					S							S				T	T						T	T	S	S			T	T										T	T	T								S					T	T		S		T	T	T					G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		169	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		D	L	I	V	K	V	D	R	V	.	.	.	.	.	.	G	D	A	A	K	I	G	A	G	A	T	R	M	T	T	N	P	R	E	L	L	I	A	R	S	A	A	D	V	I	V	N	S	G	Y	F	K	E	G	F	S	M	Q	T	G	T	G	G	A	S	L	A	V	T	R	F	L	E	D	K	M	R	S	R	D
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																															.	.	.	.	.	.												.														.	.	.	.
Template Conservation																																															.	.	.	.	.	.												.														.	.	.	.
Template Sequence		D	I	V	V	V	D	P	D	Q	S	Q	L	Y	G	G	A	P	V	N	R	F	I	S	G	D	F	T	L	D	P	L	N	Q	R	K	L	V	A	R	R	A	L	F	E	M	.	.	.	.	.	.	R	K	G	A	V	G	N	V	G	V	G	.	I	A	D	G	I	G	L	V	A	R	E	E	G	.	.	.	.
Template Known Secondary structure								T	T			S	S	T	T										T	S	S						S											T	T		.	.	.	.	.	.		T	T							S	S	.	G	G	G	G									T	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.												.														.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	A	D	F	A	L	G	G	I	T	A	T	M	V	D	L	H	E	K	G	L	I	R	K	L	L	D	V	Q	S	F	D	S	H	A	A	Q	S	L	A	R	N	P	N	H	I	E	I	S	A	N	Q	Y	A	N	W	G	S	K	G	A	S	V	D	R	L	D	V	V	V	L	S	A	L	E	I	D	T	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	C	A	D	D	F	I	L	T	V	E	T	G	P	I	G	G	I	T	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	T	R	A	I	L	D	M	T	S	Q	F	D	F	Y	H	G	G	G	.	.	.	.	L	D	V	C	Y	L	S	F	A	E	V	D	Q	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		G	G	G	S					T	T	S			S		B				.	.	.	.	.	.	.	.	.	.	.	.	.	B	S		S														T	T		.	.	.	.		S							S				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
											324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.														.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.					.	.	.	.	.	.	370	.	.	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.																		.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.							.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		F	N	V	N	V	L	T	G	S	D	G	V	L	R	G	A	S	G	G	H	C	D	T	A	I	A	S	A	L	S	I	I	V	A	P	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	R	I	P	T	L	V	D	N	V	L	T	C	I	T	P	G	S	.	.	.	.	.	.	S
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence										.				.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation										.				.
Template Sequence		G	N	V	G	V	H	K	F	.	N	G	K	.	I	M	G	T	G	G	F	I	D	I	S	A	T	S	K	K	I	I	F	C	G	T	L	T	A	G	S	L	K	T	E	I	A	D	G	K	L	N	I	V	Q	E	G	R	V	K	K	F	I	R	E	L	P	E	I	T	F	S	G	K	I	A	L	E	R	G	L
Template Known Secondary structure							S			.	T	T		.					T	T						T	T		S								S			S	S							T	T									S				B		S	S		S	S		S	B								T	T
Template Predicted Secondary structure										.				.
Template SS confidence
		385	.	.	.	.	390	.	.		.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.				.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		V	D	I	L	V	T	D	H	G	I	A	V	N	P	A	R	P	E	L	A	E	R	L	Q	E	A	G	I	K	V	V	S	I	E	.	.	.	W	L	R	E	R	A	R	L	L	T	G	E	P	Q	P	I	E	F	T	D	R	V	V	A	V	V	R	Y	R	D	G	S	V
Query Conservation																																				.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	R	Y	I	T	E	R	A	V	F	.	.	.	.	.	.	.	.	.	.	T	L	K	E	D	G	L	H	L	I	E	I	A	P	G	V	D	L	Q	K	D	I	L	D	K	M	D	F	T	P	V	I	S	P	E	L	K	L	M	D	E	R	L	F	I	D	A	A	M
Template Known Secondary structure								S	S				.	.	.	.	.	.	.	.	.	.				T	T									T	T							T	G	G	G	B	S	S													G	G	G	G	S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.											.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.