Job Description P28224 Confidence 4.30% Date Thu Jan 5 11:44:28 GMT 2012 Rank 63 Aligned Residues 68 % Identity 12% Template c3samB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:rifampicin resistance protein; PDBTitle: structure of d13, the scaffolding protein of vaccinia virus (mutant2 d513g) Resolution 2.55 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																			.																											.	.	.	.	.	.	.
Query SS confidence																			.																											.	.	.	.	.	.	.
Query Sequence		Y	Q	C	D	E	K	P	L	T	V	K	L	N	N	P	R	Q	.	E	V	S	F	V	Y	D	N	Q	L	L	H	L	K	Q	G	I	S	A	S	G	A	R	Y	T	D	.	.	.	.	.	.	.	G	I	Y	V	F	W	S	K	G	D	E	A	T	V	Y	K	R	D	R	I	V	L	N	N	C	Q
Query Conservation																			.																											.	.	.	.	.	.	.
Alig confidence																			.																											.	.	.	.	.	.	.								.
Template Conservation																																																												.
Template Sequence		V	M	T	N	D	N	Q	A	I	A	S	F	E	I	R	D	Q	Y	I	T	A	L	N	H	L	V	L	S	L	E	L	P	E	V	K	G	M	G	R	F	G	Y	V	P	Y	V	G	Y	K	C	I	N	H	V	S	I	S	S	.	C	N	G	V	I	W	E	I	E	G	E	E	L	Y	N	N	C	I
Template Known Secondary structure																		S	S																		S	S							T	T														.	T	T																T
Template Predicted Secondary structure																																																												.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions