 |
| Job Description | P28224 | | Confidence | 4.83% | Date | Thu Jan 5 11:44:28 GMT 2012 |
| Rank | 51 | Aligned Residues | 57 |
| % Identity | 12% | Template | c2gi7B_ |
| PDB info |
PDB header:blood clotting, cell adhesion | Chain: B: PDB Molecule:gpvi protein; |
PDBTitle: crystal structure of human platelet glycoprotein vi (gpvi)
|
| Resolution | 2.40 Å |
|
 |
|   |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | F | N | Q | L | V | E | R | M | Q | T | D | T | L | E | Y | Q | C | D | E | K | P | L | T | V | K | L | N | N | P | R | Q | E | V | S | F | V | Y | D | N | Q | L | L | H | L | K | Q | G | I | S | A | S | G | A | R | Y | T |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |
|   |
| Template Sequence |   |
Q | A | L | P | S | S | L | V | P | L | E | K | P | V | T | L | R | C | Q | G | P | P | G | V | D | L | Y | R | L | E | K | L | S | S | S | R | Y | Q | D | Q | A | V | L | F | I | P | A | M | K | R | S | L | A | G | R | Y | R |
| Template Known Secondary structure |   |
 |  |  | S |
| S |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
| T | T |
| S |  |  |  |  |  |  | T | T | T | T |  |  |  | S | S | S |  |  |  |  | S | S |
|
| G | G | G |
|  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|