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Job DescriptionP00722
Confidence100.00%DateThu Jan 5 10:56:50 GMT 2012
Rank20Aligned Residues273
% Identity18%Templated2vzsa5
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   340.........350.........360.........370.........380.........390.........400.........410.........
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Query Sequence  NGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETH
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Template Sequence  GRQYSVNGKPLLIRGGGYT. . . PDLFLRWNETAAADKLKYVLNLGLNTVRLEGHIEPDEFFDIADDLGVLTMPGWECCDK
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TT


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   346...350.........360.... .....370.........380.........390.........400.........410.........420..
 
   420... ......430.........440.........450.........460......... 470.........480.........490....
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Query Sequence  GMVP. . . . MNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANH. DALYRWIKSVDPSRPVQYEGGGADT
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Template Sequence  WEGQVNGEEKGEPWVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPDRRIEQGYLDAMKAADFLLPVIPAASARPS
Template Known Secondary structure  GGTTTSTTSSS



TTTT
TTB

S
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TT

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   423......430.........440.........450.........460.........470.........480.........490.........500..
 
   495....500.........510.........520.........530.........540.......
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Query Sequence  TATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSL. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PITGA. . . . . SGMKMNGPYDYVPPVYWYDKSQKDRGGAWSFNSETSAGVDIPTMDTLKRMMSASELDTMWKNPSAKQYHR
Template Known Secondary structure  SSS

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GGGGG

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   503.... ..510.........520.........530.........540.........550.........560.........570.......
 
   548.550.........560.........570.........580. ........590.........600...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . GGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDE. . . . NGNPWSAYGGDFGDTPNDRQFC
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Template Sequence  SSSDTFGNLKLFGDALTKRYGASANLNDFVRKAQLSQYENVRAEFESHSRNYTDSTNPSTGLIYWMLNSPWTSL. . . . . .
Template Known Secondary structure 
SSSTTSB



SSTT
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   578.580.........590.........600.........610.........620.........630.........640.........650.
 
   604.....610.........620......
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Query Sequence  MNGLVFADRTPHPALTEAKHQQQ
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Template Sequence  HWQLFDAYMDQNGAYYGAKKANE
Template Known Secondary structure  BS
SB
TT

B
T
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   652.......660.........670....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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